Pyrgilauda ruficollis (rufous-necked snowfinch): 121348474
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Entry
121348474 CDS
T07608
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04140
Autophagy - animal
pruf04148
Efferocytosis
pruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121348474 (VPS11)
04148 Efferocytosis
121348474 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121348474 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121348474 (VPS11)
Membrane trafficking [BR:
pruf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121348474 (VPS11)
Hops complex
121348474 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_5
TPR_GEMI5
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
121348474
NCBI-ProteinID:
XP_041314005
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVREPSGPDGAGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSVFDDIVDVLAEWGSLYVLTRDRKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKV
LRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKIL
MHHVPNETTELLKILCTDYHPSGGNEDPGMLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFRTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEASLWEQALSYFARKEE
NCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIDQDEQR
IQKYREETTRIRLEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKTATTIEAGLQRELLIHTKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtacctgcagtggcgccggttcgtctttttcgacagagagacggtgagggag
ccatcggggccggatggagccggtgcgaagcctttcgcgctgcccccgggtatcgcagtc
tgcgactcgggccggggaagcctcgtgttcggagatatggaaggtcagatttggtttttg
cctcgctcccttcaactcagcagtttccaagcttacaagctaagggtgacgcatctgtac
cagctgaagcagcacagtatcctggtttctattggtgaggatgaagagggtataaatcct
ttggtgaaagtctggaacctggagaaacgggatggtggtaatcctctttgcacacgaatt
tttccagcaataccaggtaacaagcctacagttgtatcctgcctaactgtccacgagaat
cttaatttcatggctattggttttgcagatgggagcgttgtacttactaaaggagacatc
actcgagatcggcatagtaagacccagatcctgcatgaaggcagttaccctgttactggc
cttgcttttcgacagtctggcaaaacaacacatctatttgtggtgaccacagagaacatc
cagtcttatatgctttcagtgaaagactatcctcacctggagctggacactcacggttgt
ggattgcgctgttcatctctcagtgacccctcccaggatctccagttcattgtggcagga
aatgagtgtgtgtacctttaccaaccagacgaacgtggcccctgctttgctttcgaggga
caaaagctgattgttcactggtatcgggggtacctcatcattgtctccaaggaccggaag
acttccccaaagtcagaatttgctggaaacgaggcacagaattcagacaaacaagtcctg
aatatctatgacttgtgcaacaaattcattgcatacagctcagtctttgatgacatagtg
gatgtcttggcagagtggggatctctctacgtactgaccagagacaggaagatccatgtg
ctgcaggagaaggatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagcgatggtttgtcagagattttc
cgtcagtatggtgatcatctctataacaagggaaaccacgacggagccatccagcagtac
atccgaactatagggaagctagaaccatcttatgttattcggaaattcctggatgctcag
cgtatccacaaccttactgcttatctacagatgctccatctgcagtccctggccaatgca
gaccacactacacttctgctgaattgctataccaaactcaaagacagctccaaactggaa
gagttcattaagacgagtgagagtgaggtccacttcgatgtggaaacggctatcaaggtg
cttcgccaagctggttactactcccatgctgtgtacctggcagagaagcatgagcatcat
gaatggtacctcaaaatccagttagaggacatcaagaactaccaagaggctctgcactac
attggaaaactgccctttgaacaggcagagagtaacatgaagcgatatggtaaaatcctg
atgcaccatgtccctaatgagaccactgaattgctgaagatcctttgcactgattaccat
ccctcaggaggtaatgaagaccctgggatgctagaaggaaaaaaggctaattcagaggag
ttcatcccagtctttgcaaacaattcccgagaactgaaagcttttctggagcacatgacc
gaggtgcaggctgactctccacagggtgtctatgacactttactggaacttcgtctgcag
aactgggcacatgaacaagatgagcagatcaaggagaagttgcacaatgaagccctcacc
ctcctgaagagcggaaggttcagaacagtctttgacaaggccttggtcttatgtcagatg
cacaatttcaaggatggtgttctctacctctatgagcagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaagtgattgaggtgtgcgagttgtac
ggcgaccaagaggctagtctctgggaacaggctcttagctacttcgcacggaaggaggag
aactgcaaagagtacattgctgcagtgctgaaacacatcgagaacaagaatcttatgcct
ccactgcttgttgtgcagacgctggctcataactccacagccaccctgtctgtgattaag
gattatcttgtcaacaagctgcagaagcaaagccgccagatagaccaggatgagcagaga
attcagaaataccgagaagaaactacgaggatccgcctggaaattgaagagctaaaagca
agtcccaagatttttcagaagaccaagtgtagcatttgcaccagtgcattggagctccct
tcagtccacttcctctgcggtcattcctttcaccagcactgctttgaaagctactctgag
agtgattcagaatgtcctacttgcatgccagaaaatcgcaaagtgatggacatgatccga
gcccaggagcagaagagagatctgcatgaccagtttcagcatcagctcaagtgttccaat
gatggcttctcagtcgttgctgactactttggtcgcggtgtcttcaataagctcaccctg
atcacggacttgccctcgggaaagaccgctacaaccatcgaggctggcctgcagcgggag
ctgctcatccacaccaagcgcagtacctga
DBGET
integrated database retrieval system
