Pyrgilauda ruficollis (rufous-necked snowfinch): 121348510
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Entry
121348510 CDS
T07608
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pruf04515
]
121348510 (DSCAML1)
Cell adhesion molecules [BR:
pruf04515
]
Immunoglobulin superfamily
DSCAM family
121348510 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
121348510
NCBI-ProteinID:
XP_041314070
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MWLVTFLLLYSLPKARAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVSSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCP
VVPPREASIRNLARAYHAQARHMTLEPGAKPLGLPPPASSATTLPQRTLPMPGPAGPAPA
PAASTAPAPPVAAEPPVAAAAAAEARVPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYS
KSYTLV
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacgcgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtgaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcgctggtacctg
gccacaggtgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaacagcttcatccacgacaacgactac
ttctgcaccgcagagaactcggctggcaagatcaggagcccgaacatccgtgtcaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcctcagtgcaggaatacgttagcgttgtatcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggcgcccgcctctccgtctcagacccg
gcggagtccatccccacgatgttagacagcttccagtccagggaggtgaaggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtgcggtggatcaag
gacgggcggccgctccccgccgacagccgctggaccaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcaccggcaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacgggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccgcaacacggacctggtggcggtggatgactacatc
tccatccggggcatcagcaacgagaccctgctcatcacggccgcccagaagagccactcc
ggggcctaccagtgctttgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggccccgccacccaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tccgacggcaccaccgtgagccacatgaacgtgagcagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgcgccatgaagaacataacagcggttgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tcgctgctgctgcccgataaccaccgccaagtggtctttgagaacggcaccctgaagctg
atggatgtgcagaaaggcatggatgaaggagagtacctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcaccgtcaaagtccctcctctgatccagccc
ttcgagttcccgccagcctccatcggacagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctctggctct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagtgtgtccctc
aagcacaacgggaactacacctgcatcgccagcaacgacgctgccaccgtcagccgggag
cggcagctgatcgtgcgggtgcctcctcgctttgtggtccaacccaacaaccaagatggc
atctatggaaaagccggggtgctgaactgctctgttgatgggtacccccctcccaaagtc
atgtggaagcacgctaaaggaagtggcaacccccagcagtaccaccccatccccctgacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcaccgtcaagatcccggccatgatcacctcccaccccaacaccaccatcgccatc
aagggccagaccaaggagctgaactgcacggcgcggggcgagcggcccatcatcatccgc
tgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgaccgcggggac
tccgtcttcttctcctgtcacgccatcaactcctacggcgaggacagaggcttgatccag
ctcactgtccaagagccccctgacccgccggagctggagatccgtgaggtgaaagcccgg
agtatgaatttgcgatggacgcagcggttcgacggcaacagcatcatcaccggctttgat
atcgagtacaagaacaagtcagattcctgggattttaagcagtctacacgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctgcaccctgcctccgtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcagcacc
gaggaagcagctcccgatggccctccgatggatgtcaccttgcagccgatcacgtcccag
agcatccaggtcacctggaaggcccccaagaaggagctgcagaacggggtgatccgtggc
taccagatcggctaccgggagaacagcccgggcagcaacgggcagtacagcatcgtggag
atgaaggccacgggggacagcgaggtctacacgctggacaacctcaagaagtttgctcag
tacggggtggtggtgcaggcgttcaaccgcgcgggcacggggccctcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaacgtgcgcgccatctcc
atcacctcggacgtggcggtgatctcctggtcggagcccccgcgcagcaccctcaacggg
gtgctcaagggctaccgggtcatcttctggtccctctacatggacggagagtggggcgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaaattcacc
aactacagcgtgcaggtgctggcctacacccaggcgggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccagctgggatcaaggctgtgccg
tcctctgccagcagcgtggtggtgtcctggctgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggcacccagcgagtac
gagaccagcccggaccagctcttctaccgcatcgcccacctgaaccggggccagcagtac
ctgctctgggtggccgctgtcacctctgcgggccgcggcaacatcagcgagaaggtcacc
atcgagcccgcgggcaaagcccccgccaagatcatctccttcggaggcaccgtcaccacg
ccctggatgaaggacgtgaggctgccgtgcaactctgtcggggagccggtccctgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacggtggacggccaccgcctg
atccaggccaacgggacgctggtgctgcgctcggtgaaggccgaggactccggctactac
acctgcactgccaccaacacctggggctttgacaccatcatcatcaacctgctggtgcaa
gtgcccccagaccagccccgcctgaccgtctccaagacctcggcatcgtccatcacgctg
gcctggatccctggggacaacgggggaagctccatccgaggcttcgtgctgcagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctcctccgagcgctccttcaag
ctggagagcctcaagtgtggcacctggtacaaggtgaagctggcggccaagaacagcgtc
ggcgccggccgcatcagcgagatcatcgaggccaagacccacggcagagaaccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctcaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtgctggagtaccggcccaagggc
aactgggtgtggcagagcctgcgcaccaacagctccagcgaggtgttcctgaccgagctg
cgcgaggccacctggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccgcgcagttcgccacgctggactacgacggcagcaccatccccccgatcaagtct
gcccaaggggaaggtgatgacgtgaagaagctcttcaccatcgcctgccccgtgatcctg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgcaaagagtttggcagaaatgctgatcagcaagaataaccgcagc
tttgacacgccggtgaaggggcccccacagggcccccgcctgcacatcgacatcccgcgg
gtgcagctcctcatcgaggacaaggagggcatcaagcagctgggggatgacaaagccacg
atcccggtgaccgacacggagttcagccaggcagtgaacccccagagcttctgcacgggc
gtctctctgcaccacccagccctgatccagaacacggggcccctcatcgacatgtccgac
atccgtcctggcaccaaccccgtgtcgaggaagagtgtgaagtctgcacacagcacccgc
aacaggtactccagccagtggacactcaccaagtgccaggcgtccacacctgcacggacc
ctcacctcggactggaggacagtgggctcccagcacggcatcacggtcactgagagtgac
agctacagcgccagcctctcgcaggacacagacaaggggcggaacagcatggtgtccacg
gagagcgcctcgtccacctacgaggagctggcgcgcgcctacgagcacgccaagctggag
gagcagctgcagcacgccaagttcgagatcaccgagtgcttcatctccgacagctcctcg
gaccagatgaccacgggcaccacggacaacgccgacagcatgacctccatgagcaccccg
tccgagcccggcatctgccgcttcaccgcctccccgcccaagccccaggacagcgagcgc
ggcaagggcgtggccgtgcccatcccacaccgcgccagcaagagtgactactgcaacctc
ccgctgtacgtcaagtcggaggccttcttccgcaagcccgacgcgcacgagccgtgcccg
gtggtgccgccgcgggaagcctccatccgcaacctggcccgggcgtaccacgcgcaggcc
cggcacatgacgctggagcccggcgccaagcccctggggctgcctcccccggcctcctcc
gcaaccaccttacctcagaggactctccccatgcccggcccggccggccccgcacccgcg
cccgccgccagcaccgccccggctccccccgtggccgccgagccccccgtggccgccgcc
gccgccgccgaggcgcgggtgcccacgcactccaaagtggggggctccagggactcactg
ctggagatgagcacgtcgggggtaggcaggtctcaaaaacagggtgccggagcctactcc
aagtcctacacgctggtgtag
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