Pyrgilauda ruficollis (rufous-necked snowfinch): 121348660
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Entry
121348660 CDS
T07608
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121348660 (SMC5)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121348660 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_25
AAA_21
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
121348660
NCBI-ProteinID:
XP_041314374
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MAAAREKGKAVKRAESKYPFVLGSIVRIFMKNFLTYTVCEVRPGPNLNVVVGANGTGKSS
IVCAICLGLAGKPAFLGRADKIGLFVKQGCMKGVVEIELFKSPDNIVITREIYVMNNASV
WFINGKPTTLKTVEEKIAALNIQVDNLCQFLPQDKVGEFTKLSKTELLEATEKSIGSPEM
YQFHCELKNFREKERELENLCREKTTSLEKMKQRVERYKQDVERYHECKRHVDLIEMLER
KRPWVEYENVREQHEEVKQCRNQAKKELKNLKEMQAPWTRRIQEAEENLNNLDMQTRDIT
AEIRNISQKCKEKQDALEMKDKQIEEINQAFRMKKDEETNRQKKIYQTQKIIEEWQNELD
TMAVGENLQPQIDAVNTELKNLQEEKANIDNDISDLRAEKTNQEREGKRIIDRLGQLNNI
MHMKEENLKMRFRDTHSALMWLRNNKDKFKKKTCEPMMLEINMKDSRHAKYIENHISSND
MRAFVFECQEDMETFLVEVRDRQKLRVNAVCAPAESCAENLPSRPIEELHRYGFYSYLRE
LFDAPPPVMSYLCYQYHVHNVPVGTQKTRDMIERVIQETNLRHMYTAEEKYIIKVSSYTK
QNLSSNICLKEAQYLTSSVDTEERGQLENQRQDISNTLKSLDARLTALFDRQKLLDHKDN
KLRQEKKELLERGNRRRQLESKIGVKYDSLRQLEQDAIDLEKEFQLANVKIKEINKQKSE
LVTELTHLMKRIIPLNVVKVNLAFQMTRVTAEKNRLQSEYKEGTVQLRALQRRFHELDNR
KQLLYEKCMELMKQARQVCRLGPDQGFPEEFKVAFQTLPNTLEEIDAFLNEEKTRASCFT
GISASVVEEYNKQTQEIQQLTEYLEEKKNELNNYKQNISQVKEKWLNLLKVMIEQINGKF
SKFFSSMQCVGEVDLHMENEEEYEKYGIRIRVKFHSSTELHELTPYHHSGGEKTVSTMLY
LMALQELNRCPFRVVDEINQVRINSMVLLFLCTDAYDIVERTDFFFSFQGMDPMNERRVF
EMVVETACKKRTSQYFLITPKLLQNLTYNDKMTVLFVYNGPFMLETYKWNIKQFKRRQRH
LSSMTES
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcgggaaaaggggaaagctgtgaagcgcgctgagtccaagtaccccttc
gtactgggctccatcgtcaggatctttatgaagaacttcttaacatacactgtctgtgaa
gtacgcccagggcccaacctgaacgtggtcgtaggtgctaatggcacaggcaagtcaagc
attgtttgtgccatttgcctgggactggctggaaaacctgctttcttaggccgagctgat
aagatcggtctgtttgtgaagcaggggtgcatgaaaggcgtagtggaaattgaactgttt
aagtcaccagacaatattgtcatcacacgtgagatatatgtgatgaacaatgcatcagtg
tggtttatcaatggaaaaccaacaaccctgaaaacagtagaagaaaaaattgcagcctta
aacatccaggtggacaatttgtgccagtttcttcctcaggacaaagttggagaatttaca
aaactgagtaagactgagttgctcgaagccactgaaaagtccattggttctccggaaatg
taccagtttcattgtgaactgaaaaatttcagagaaaaggaaagagaactagagaacttg
tgcagagaaaaaaccacctcattggagaaaatgaaacagagggttgaacggtacaagcaa
gatgttgaaagataccatgaatgcaagcgccatgtagacttaatagagatgcttgagagg
aaaaggccatgggtggaatatgaaaatgttcgtgaacagcatgaagaagtgaaacagtgc
cgaaaccaagctaagaaagaattgaagaatctgaaagaaatgcaggccccatggacaaga
agaatccaagaagctgaagaaaacttaaacaacctggatatgcaaacaagagatattact
gctgaaatcagaaatatttcccagaaatgtaaagagaaacaagatgctttggagatgaaa
gataaacagattgaagaaattaatcaagcattcagaatgaaaaaagatgaagaaacaaac
aggcagaagaaaatataccaaactcaaaaaataatagaggagtggcagaatgagctggat
acaatggcagttggtgagaatcttcagccacaaattgatgctgttaatactgagctgaaa
aatttacaagaagagaaggcaaatattgataatgatatcagtgatctaagagcagaaaaa
accaaccaagagcgggaagggaaaagaataattgatcgccttggacaacttaacaatata
atgcatatgaaggaagagaaccttaaaatgagattccgagacacacactctgctcttatg
tggctaagaaacaacaaagacaagtttaaaaaaaaaacgtgtgaacccatgatgcttgaa
atcaatatgaaagacagcagacacgcaaaatacattgaaaatcacatttcgtccaatgac
atgagggctttcgtttttgaatgtcaagaagatatggagacatttctggtggaggtgcgt
gatcgtcagaaactaagagtgaatgctgtatgtgcacctgctgaatcatgtgctgaaaat
ttaccttcaagacctattgaagaattacaccgatacggattttattcatatttacgagag
ttatttgatgctcctcctcctgtgatgagttacctttgttaccagtaccatgttcataat
gttcctgtgggaacacagaagaccagagacatgattgaaagggtcatacaggaaaccaat
ctgaggcatatgtatacagcggaagaaaaatacattattaaagtatcttcttacacaaaa
caaaacctctctagtaacatatgcttgaaggaggcacagtatctcactagttcagtggat
acagaagaaagaggacagctggaaaaccaacgacaggacatcagtaatactttaaagtcg
ttggatgcacgtttgactgcactgttcgacagacagaaacttctggatcacaaggacaat
aagctcaggcaagagaagaaggagcttttagagagaggaaaccggaggaggcagttggaa
tcaaaaattggtgtgaagtatgatagtttaagacagctcgaacaagatgctattgaccta
gagaaggaatttcagctggcaaatgtaaagatcaaagaaataaataaacaaaaatcagaa
cttgttactgaattgacgcatctcatgaagaggatcataccattgaacgtcgtcaaagta
aatttggcttttcagatgaccagggtgactgctgagaagaacagactacaatcagagtac
aaagaaggaactgtacaactaagagctctacagcgacgttttcatgaactggataatagg
aagcaacttctttatgagaagtgcatggaattgatgaaacaggctcgacaagtctgcaga
ttgggtccggatcaaggttttccagaagaatttaaagttgcgtttcagactcttccaaac
acattggaagaaattgatgcttttctgaatgaagagaaaaccagggcttcctgtttcaca
ggcatcagtgcttcggttgttgaagaatacaataagcaaacacaagaaatacaacagtta
acagaatatctagaggaaaaaaaaaatgagttgaataactataagcaaaacatttcacag
gtcaaagaaaagtggctaaacctcttgaaagtgatgattgaacaaattaatggaaagttc
agtaagttctttagctctatgcagtgtgttggtgaagttgatcttcatatggaaaatgag
gaggagtatgagaagtatggaattcgcattagagtcaaattccacagtagcactgaactt
catgaattgactccgtatcatcatagtggaggtgagaaaactgtttccactatgttatac
ctgatggctctgcaagaactcaacagatgtcctttcagggttgttgatgaaataaatcag
gtgagaatcaacagtatggtattgctcttcctgtgtacagatgcttatgacatagtggag
agaacagacttttttttttcttttcagggaatggatccaatgaatgagagaagagttttt
gaaatggttgtggaaactgcttgtaaaaaaagaacatctcagtacttcctcattacacca
aagctcctgcagaatctcacttacaatgacaagatgactgtgctgtttgtctacaatgga
ccttttatgctggagacgtacaaatggaacataaagcagtttaagagacggcaacggcac
ctttcaagcatgactgaatcttaa
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