Pyrgilauda ruficollis (rufous-necked snowfinch): 121348854
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Entry
121348854 CDS
T07608
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pruf04515
]
121348854
Cell adhesion molecules [BR:
pruf04515
]
Cadherins
Cadherin related
121348854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Cadherin_2
EGF
Cadherin_pro
hEGF
Laminin_G_3
Big_9
cEGF
He_PIG
Motif
Other DBs
NCBI-GeneID:
121348854
NCBI-ProteinID:
XP_041314744
LinkDB
All DBs
Position
Unknown
AA seq
2856 aa
AA seq
DB search
MGPRGARRGARRAAGCLLLCWALAAARAAPRRTPSFDGHVAENRPAGTRVRGLSIPLTRL
GPEPWCAKVQGRRWHLQLLGEGHSHFQVSLDARTARVWLRTRRPLDREARALYSLRLGLC
CKRCAPQGAAPAELAALTVRVLDDNDNAPRFVGPGSAQLRVEETLALKSQVWQARAEDAD
AGANAELRYFALPRSAHFFVVPRSGRVVLVSSLLHLRAPIPLRLYARDRGRPALLSEPLE
LEVLPQPKRLPPPPPRRRRAALPPAAPLALALPENARPGIRLATLAPARFSSAWFELLSP
PVEESPVSVERESGEVTLRAALDREAVATWELVVRVQERRGKDWYLVHMSLTVTDVNDNV
PEWAMEPFPFLAVVSPEAAGGTEVYKLLAVDADEGIHGSVEYFLLEGGEDRFEVEKDTGW
IKTTGLPLVRDKEYLLTVLAADKLGSRGSPASVSVIAGFRPPQFTNISYSVYVPESTPQG
EPFLTVTAVSYQKKSLSYSLLTNPGGLFSIDPATGELSLTRSVDYEGDPHQFLLLVRAEE
SEGQFSTAAEVLVVITDVNDCAPEFHQSIYSKVGVSETVPMTTALLQVTATDCDSKENAQ
LLYYTLSQDFSITSHGTIFPATRLDYERPDHLYEFIIMAVDQGEEPRTGTATVRIHVSNV
NDEAPEFSQTIYRSFVSEDAGPNTLIATVNAVDPDGDGVTYDILSGNERGNFVIDPKKGL
VRLRASPFPELQGTEYVLNVTATDDNASGGPHPLTSTAQVVVKIDDVNNNKPVFQKCQYY
REHASVLENQPSGTVVLQVEATDADEGANGIVKYGLMHRDGVLPAFSIHPDTGVLTTVQV
FDREKQREYPITVTATDQAAEPLIGICQINIVILDQNDNDPRFENTHYEYFLKEDTRVGT
SFLRVAARDDDYSSNAAITYSIASDEPNYLQINPTTGWVFVNQPISQKSSIIREIIATDG
GNRSSKVELAVTVTSAKNQPPQWERDSYEVVIPENTTRDASILTIKATSPLGDPRVTYNL
EEGLVPETNMPVRFYLTPNRHDGSASILVAEPLDYETTKSFQLRVRAQNVAAVPLAAFTT
VHVNVTDVNDNVPFFTSSIYEASVTEGADVGTFVTQVSATDLDLGQHGEVTYSLLHDSGR
DYTCFRLDPQTGSIYTTSVFDREEKGSYLLEVKSVDGSESARPGKHGKPNSDTAYVRVSV
SDVNDNQPVFAQSVYEVSVDEDQDVGSTILTVSANDEDEGTNAKLRYQITAGNTGGVLDV
DPETGAIFIAQPLDYEETKMYEIQLLASDGKWEDYAVIIINIMNKNDEAPVFSINEYYGS
IIEELDSLPVFILQVMATDPDSGVDGGDLRYSLHGYGAADIFTIDEKTGSIYSHKRLDRE
ERALWRFIVLATDEGGGGLTGFADVIINVWDINDNAPTFSCMPDDCNGNVFENSPADTLV
MEMAAVDRDDPNVGVNAVLTYRITENVKNEFGTDMFSINPSTGTIHVAEGLLDRERTESY
FLTVEARDGGGLTGTGTATVWVADVNDNVPKFTKKLWQAAIPENSAIDSEVLQVCATDAD
IGENADLMFSIIGGDPDEKFYIENDKEWQCGTVRLKKKLDFENARERQFNLTITVEDLDF
SSVAVCLIEVEDSNDHSPAFLSQFIQTNPVFEDVPVGTTVTTVRATDKDSDLNGKIIYSI
KSDSDPMRQFVVDQFGHVVVASALDREAIQKYALIVQAADQGTPARTGSVTVLINLRDIN
DNGPRFEAPYMPVVWENTLKPEIVHMNHTSKLLHAFDPDAEENGPPFAFSLPPEYQNSLD
FSLTDNRNNTATITALRSFDREKQKVFHLPIVITDSGIPAMSSTTTLTITVGDENDNCHE
SGHKEVYVYSYKGKWSTTVLGEVFAPDQDDWDNKTFLSEGKLLKSFRLNQRTGSLLMVDN
TPPGIYNLRVRVSDGVCPDVISTVQIHVRDLENEAIQNSATVRFSGVTAEEFVRRDEHGK
TRHGEFKEFLAKLLPAKLSDVIVFSVMGRDGKQTDVRFAVRAGSAYYRPEKLHAEMAAFK
TEMQSALRLNVSQIDVDECRSANCSEGCTNHLSVSDIPTVMDTGSVSFVSLSTSSHGLCA
CSARERLHQPCSSYARSPCLNGGLCVDTLNGYRCLCPASFHGPDCQQTKHSFHGNGYAWF
RPIRPCFESSLSLEFITVVPDGLLLYSGPLSNPEPGSTENFIAIELSSGVPVLKMSHGAG
SVVLQFPSHLNVADKKWHRLEVRTNGQAVRFTLDQCSAAALSEIEGVGRWLSTEDRTNCE
VPGSVPRRARYLNVNHVLQLGGVKESIPYSYPQLLHKHFSGCLRNFILDTQVYDLQSPAE
SLNSFPGCTLTDGSCETMGSSSCGAHGQCLGDWGSFACHCLPGYHGYRCDKVAKEYRFEA
GSHIRYQLPVSVSARRTRLQALVRTRQPDGVIATVLSRARDEHITLQVVQGLLAVSYNLG
DGNYSVSLPSYHIDNGEWHHITLERNENEFTLRLYEGGGKREITKAAGIYKEIVIDPSSL
VLGNTYPFSQNRSFQGCMKDVRFNNYRIPLDTHGKELVSVLSAQGIKEGCSSEACRNNPC
NQEFICIDLWMMHECSCPAGHMILENASGRQCVHTACAERPCNYGTCVSLSPSSFQCHCP
DGYTGRHCEITLAIFHKDTGLSFTSLFAICVCFLALLALLSAAFLWAHWKTRKGLHGGVY
HGSAHPEDLEDIRENILNYNEEGGGEQDEDAYNMAELQVSIQGSPAYSRHRRKELPAPRQ
AAVRARPGPAGGAALGRALPALLREAERRGPGPPQDSLRVFCTEGAGSSAGSLSSLSSLS
SAGLGGGSSACEDIHEWGPKFEKLRELYSHREAGDL
NT seq
8571 nt
NT seq
+upstream
nt +downstream
nt
atgggcccccgcggagcgcggcgcggagcccggcgcgccgccggctgcctgctgctgtgc
tgggctctggccgccgcccgcgccgccccgcgcaggacaccctcgttcgacgggcacgtc
gcggagaaccggccggcgggcacgcgggtgcgcgggctcagcatccccctgacgcggctg
gggcccgagccctggtgcgccaaggtgcaggggcgccgctggcacctgcagctgctgggc
gagggacactcgcacttccaggtgtcgctggacgcgcgcacggcccgcgtgtggctgcgc
acccgccgcccgctggaccgcgaggcgcgggcgctgtactcgctccgcctggggctgtgc
tgcaagcgctgcgcgccccagggcgccgcgcccgcggagctggccgcgctcaccgtgcgc
gtcctggacgacaacgacaacgcgccgcgcttcgtggggcccggctccgcgcagctccgc
gtggaggagacgctggcgctcaagtcacaggtgtggcaggcgcgggccgaggacgcggac
gcgggcgccaacgcggagctgcgctacttcgccctcccgcgcagcgcgcacttcttcgtg
gtgccgcgcagcggacgcgtggtgctggtgagctccctgctccacctgcgcgctcccatc
ccgctgcgcctctacgcgcgggaccgcggccggcccgcgctactcagcgagcccctggag
ctggaggtgctgccgcagcccaagcgcctcccgccgccgccgccccgccgccgccgggcc
gcgctgccgcccgccgcacccctggcactggccctgcccgagaacgcccggccgggcatc
cgcctggccaccctggccccggcgcgcttctcttccgcgtggttcgagctgctgtcgccg
cccgtcgaggagtcgccggtgagcgtggagcgagagagcggcgaggtgacgctgcgagcg
gccctggacagggaggcggtggccacctgggagctcgtcgtccgcgtccaggagcggcga
gggaaggattggtacctggtgcacatgtcacttactgtgacagatgtgaatgacaacgtc
cctgagtgggccatggagcccttccccttcctggctgtggtttcccctgaggctgcagga
gggactgaagtgtacaagttgcttgctgtggatgcagatgaagggatccatggatctgta
gaatattttctcttggaaggtggtgaagacagatttgaagttgagaaggacactggctgg
attaaaacaacaggtttgccattggtgagggacaaggagtatttgctgactgtactagca
gcagataaactcggaagcagaggatccccagcctctgtttctgtaattgctggatttcga
ccaccccagttcaccaacatctcatactctgtgtatgttcctgagagcaccccgcaagga
gaaccctttcttacagtcactgctgtttcatatcaaaagaaatccctgagctacagtttg
ctcactaatcctgggggtctgttcagcattgatccagcaacaggagagctcagtctaact
cggagtgtggattatgaaggagacccccaccagttcctccttttggtcagggcagaggag
agcgaggggcagttcagcactgctgctgaggttttggttgtaatcacagatgtgaatgat
tgtgcccccgaatttcatcagtcgatttacagcaaagtcggtgtttctgaaacagttcct
atgacaactgcacttctccaagtgacagccactgactgtgattccaaggagaatgcccag
ttgctgtattacactctgagccaagacttcagcattacttctcatggcactatttttcca
gccacacggttggactatgagcgccctgaccacctctatgagttcatcatcatggctgta
gatcagggggaagagcccaggactggcacagcaactgttaggatccatgtctccaatgtg
aatgatgaagcgcctgagttttctcagactatctacaggagctttgtttctgaagatgca
ggcccaaacacactgattgccacagttaatgctgttgatcctgatggagatggtgtgaca
tatgatattctgtctgggaatgagagagggaactttgttattgaccctaagaaagggcta
gttagacttcgtgcaagcccatttcctgagctgcaggggacagagtatgttctgaatgtc
acagctactgatgataatgcctctggagggccccatcctctcaccagtactgcccaggtt
gttgtgaaaattgatgatgtcaacaataacaaacctgtctttcagaagtgccagtattat
cgggaacatgcttctgtcctggaaaatcagccttcagggactgttgttctgcaggttgaa
gccactgatgctgatgaaggggccaatggaatagtgaaatatggcttgatgcacagagat
ggtgtcctgccagcatttagcattcaccctgacacaggagttctgacaactgttcaggta
tttgatcgagaaaagcagagggaatatcccatcactgtgacagcaacagatcaggcagcg
gagccactcattggaatatgtcagatcaatattgtcatcctggaccaaaatgacaatgac
cccagatttgaaaacacccactatgaatatttccttaaagaggacacaagagttgggacc
agcttcctgcgtgttgcagcccgtgatgatgactacagctcaaatgctgccattacatat
tccatagcgagtgatgaaccaaattatttacagattaatcctaccacaggctgggtgttt
gtgaaccaacccatatctcagaagtcatctataattcgagagattattgctacagatgga
ggcaacaggagcagtaaagttgaacttgctgtaactgtaaccagtgcaaaaaaccagcct
ccacagtgggaaagagacagctatgaagttgttattccagagaatacgacacgggatgcc
tcaattttgacaatcaaagcaacttctccccttggagatccccgtgtcacttacaacctg
gaagaggggcttgtcccagagaccaacatgccagtgcgtttctacctgactccaaacaga
catgatggctctgcttcaatcctggtagctgagcccctggattatgaaacaacaaagagc
tttcagctgcgggtgcgagcacagaacgtggctgcagttcctctggcagcgttcaccacg
gtccatgttaatgtcacagatgtcaatgacaatgtcccattcttcacttcatccatttat
gaagcctcggtaacagagggagctgatgtggggacatttgtcactcaggtgtctgccaca
gacctcgaccttggtcagcatggtgaggtaacttactccctgttacatgacagtggcaga
gactacacctgttttcgcttggacccccagacaggctccatttacaccacctcagtgttt
gacagagaggagaagggctcctaccttctggaagtcaagtcagtggatggctctgaatca
gctcgacctggaaagcatggcaagccaaactctgacacggcgtacgtgcgcgtgtccgtc
agcgacgtgaacgacaaccagcccgtcttcgcccagagcgtctacgaggtgagcgtggac
gaggaccaggatgtgggatccaccatccttacagtcagtgctaacgatgaggatgaagga
acaaatgctaagctacggtatcagatcacagctggaaacacaggaggggtgctggatgta
gatccagaaacaggagccattttcattgcccagccactggactatgaagaaacaaaaatg
tatgagatccagttgttggcctctgatgggaaatgggaggattatgcagttatcatcatc
aacatcatgaataaaaatgatgaggctccagttttttctatcaatgaatactatggaagt
ataattgaggaactggattcgttgccagtcttcatacttcaggttatggccactgatcct
gatagtggtgttgatgggggagatttgagatattccttgcatgggtatggtgcagctgac
attttcacaatagatgagaaaacaggcagcatttactcccataagaggctggaccgggaa
gagagagccctgtggagattcattgtgttggccactgatgaaggtggaggaggacttaca
gggtttgcagatgtgatcatcaacgtgtgggatataaacgacaatgcacccacgttctca
tgcatgcctgatgactgcaatgggaatgtttttgaaaactctcctgcagacaccttagtc
atggaaatggctgcagtggatcgcgatgacccaaacgttggtgtgaatgctgtcctgaca
tacaggataacagagaatgtgaagaacgagtttggtactgacatgtttagtatcaatccc
agtaccgggaccatccacgtggcagagggactgctggacagggagagaactgaaagttac
ttccttactgttgaagcaagagatgggggagggctaacaggaactggcactgccactgtc
tgggttgcagatgtcaatgataatgttcccaaattcacaaagaagctgtggcaggcagca
attcctgagaacagtgccattgactcagaagtcctgcaggtgtgtgctacggatgcagac
attggggaaaatgcagacttaatgttcagtatcattgggggagacccagatgagaagttt
tatattgagaatgacaaagaatggcaatgtggcactgttcgactgaaaaaaaagttggat
tttgagaatgcccgtgaaaggcagtttaatcttactattactgtggaagatctggatttt
tctagtgttgcagtatgcctgattgaagttgaagactcaaatgaccacagcccagctttc
ctttctcagtttattcagacaaaccctgtatttgaagatgtgcctgtaggtactacagta
accacagtgagggctacagacaaggactctgatttgaatgggaagattatctattctata
aagtcagattcagaccctatgagacagtttgtggttgaccagtttggtcacgtggttgtg
gcaagtgcccttgatcgtgaagccattcagaaatacgctctaattgtacaagctgcagat
caggggacacctgcccgcactggaagtgttacagttttaattaacttgcgggatattaat
gacaatggaccaaggtttgaagcaccatacatgcctgtagtttgggagaatacattgaag
cctgagatagtgcatatgaaccacacctcaaagctacttcatgcgtttgatccggacgct
gaggaaaacgggccaccctttgccttttcattgcctccagaatatcagaattccttggac
ttttctcttactgacaacagaaataacacagcaactataacagctttgaggtcctttgac
agagaaaagcagaaggtgtttcacctgccaatagttataacagatagtgggattccagct
atgagctcaacaaccaccctgactataacagttggtgatgagaacgacaactgccatgag
tctggccacaaggaggtctatgtgtacagctacaaaggaaaatggtcaacaacagtgctt
ggggaagtgtttgcaccagatcaggatgactgggacaataaaacatttctctctgaagga
aaactgctcaaatctttcagactaaatcagaggactgggtctttgctgatggtggataac
actcctccgggaatatacaacttaagagttagagtttctgatggagtttgtcctgatgtt
atatctacagtacaaatccatgtcagagacctggaaaatgaagccatacaaaactcagcc
actgtgcgtttctcaggtgtcacagcagaggagttcgtaaggagagatgaacatggcaaa
acaagacatggcgagttcaaggagttccttgcaaaactgttacctgcaaagctgagtgat
gtgattgtcttcagtgtgatgggcagggatggaaaacagacagatgtgagatttgcagtt
cgtgctggctcagcctattacagacctgagaagctgcatgcggagatggcagccttcaaa
actgagatgcagtcagctctgcgactgaacgtttcccagatcgatgttgacgagtgcagg
agtgccaactgcagtgagggctgtacaaaccacctcagcgtgagtgacatccccacagtg
atggacacggggagcgtgtccttcgtgtccctgagcacctccagccacgggctctgcgcc
tgctctgcccgcgagcgcctgcaccagccctgctcctcctacgcccggagcccctgcctc
aacgggggcctttgtgtcgacactctgaacggctacagatgtctttgtcctgcttccttt
catggaccagactgccagcagactaagcacagtttccatggaaatggttatgcatggttt
cgtcccatcagaccttgttttgaaagctcactctctctagagtttattactgtggttcca
gatggacttttactatatagtggccctttatcaaatccagaacctgggagtacagaaaac
ttcattgcaatagaactctctagtggtgttcctgtgctgaagatgagccatggcgcaggt
tctgtggtgctgcagtttccaagtcatctgaatgtagcagacaagaagtggcatcgactg
gaagtcagaaccaatggtcaggctgtccgcttcactctggatcagtgcagcgccgccgcg
ctctccgagatcgaaggcgttggccgctggctgtccaccgaagatcgcaccaactgcgaa
gtcccggggtctgtgccacggagagcaaggtatttgaatgtgaaccatgttctccagctg
ggtggtgtgaaagagtccataccatactcctacccacaattgctacacaaacatttttct
ggctgcttgcgcaatttcatcttggatactcaggtatacgaccttcagtctcctgcagag
tccctgaacagcttccctggctgcaccctgacggatgggagctgtgagaccatgggatct
tcctcctgtggtgcccatgggcagtgccttggggactggggctcgtttgcatgtcactgt
ttgccaggctaccacggctatcgatgtgataaagtggccaaggagtacaggtttgaggca
ggcagccacatccgctaccagctgccggtcagcgtgtctgcgcgcaggacgcggctgcag
gccctggtgcgcacgcggcagcccgacggcgtcatcgccaccgtgctgtcccgggccagg
gacgagcacatcaccctgcaggttgttcagggactcttagcggtctcatacaatctgggt
gatggaaactattctgtaagccttccctcctaccacattgataacggtgaatggcatcac
atcacactggagagaaatgaaaatgaatttactcttcgcctttatgaaggaggtgggaag
agagagattactaaagcagcaggaatatacaaagagattgtcattgaccccagcagcttg
gtccttggaaacacctacccattcagccaaaacaggagttttcaaggatgtatgaaggat
gtcagatttaacaattacagaatccctctggacactcatgggaaggagctggtgtcagta
ctgagtgcccaaggcatcaaagaaggctgttcttcagaggcctgtaggaataacccttgc
aaccaggaatttatttgtattgatttgtggatgatgcatgaatgcagctgccccgcagga
cacatgatcctggagaacgcctcaggccggcagtgcgtgcacacggcgtgcgccgagcgg
ccctgcaactacggcacctgcgtgtccctgtcccccagcagcttccagtgccactgcccc
gacggctacaccgggcgccactgcgagatcaccctggccatcttccacaaggacacgggc
ctcagcttcacctccctcttcgccatctgcgtctgcttcctggcactcctagctctgctc
agcgccgccttcctctgggctcactggaagacgcgcaagggtctgcacggaggcgtttac
cacgggtctgctcatcctgaggatctggaggacatcagggaaaacatcctcaactacaat
gaagaagggggtggggagcaagatgaagacgcctacaacatggcagagctgcaggtgtcc
atccagggcagcccggcctattcccggcacaggaggaaggagctcccggccccgcggcag
gccgccgtgagggcgcggcccggcccggcggggggcgcggcgctgggccgggcgctgccc
gcgctgctgagggaggccgagcgccgcggcccgggcccgccgcaggactcgctgcgcgtc
ttctgcaccgagggcgccggctccagcgccggcagcctcagctccctcagctccctcagc
tccgcggggctgggcggcggcagcagcgcctgcgaggacatccacgagtggggacccaag
ttcgagaaactgagggagctgtactcgcacagagaggcaggagacctgtag
DBGET
integrated database retrieval system
