Pyrgilauda ruficollis (rufous-necked snowfinch): 121348915
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Entry
121348915 CDS
T07608
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pruf04812
]
121348915 (KATNB1)
Cytoskeleton proteins [BR:
pruf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
121348915 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
WD40_RFWD3
RMC1_N
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_WDR11_1st
VPS8_N
WD_LRWD1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
121348915
NCBI-ProteinID:
XP_041314858
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MAVAVTTKTAWKLQEIMAHSSNVSSVVLGKGSGRMLATGGDDCRVNIWSVSKPNCIMSLT
GHTSPIESLQVNPNEKLIVAGSRSGSIRVWDLEAAKVLRTLPGHKANICSLHFHPFGSFV
ASGSLDTNIKLWDVRRKGCIFTFKGHTEAVRCLRFSPDGKWVASAADDHTVKLWDLTAGK
LMFEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSISNNQLIGVSFAQSTVSSFVV
DLSRVPKSDSVPHGLIRDDQPLVPPTPTGSSLRRIYDRPSTSCSKPQSRVKHNSESERHS
PSSEDDRDEKESKAEIQNQEDYKEIFQPKNAICRTPPRNEPFPAPPEDEPGTAKEAVKPS
QAVDVQTSLPKQELPDPVQRPLIASSTSLSRTEPSVIPAARNEPIGLKASDFLPAVKSQS
QTELVDEEAMSQIRKGHETMCVVLTSRHKNLDAVRAVWSTSDIKNSLDSAVAINDLSVVV
DLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA
APPSVGVDISREERLHKCKLCYKQLKNISNVVKNKSGLSGRHGSAFRELLLLMAVLD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggccgtcaccacgaagacggcatggaagctgcaagagatcatggcccacagc
agcaatgtatcctcagtagtcctgggaaaaggttcaggccggatgctggccactggagga
gacgactgtcgggtcaacatatggtcagttagcaagcccaactgcatcatgagcttgaca
ggccacacatcccccattgagagcctacaggtcaacccaaatgagaagctcatagttgca
gggtcccggtcaggctccattcgagtttgggacctggaagctgccaaagttcttcgtacc
ctaccaggtcacaaagcaaatatctgcagccttcatttccatccttttggaagctttgtg
gcatctggctctttggacaccaacattaagctctgggatgtaagaagaaaaggctgtatc
ttcacattcaagggtcacacagaagcagttcggtgtctccgcttcagccctgatgggaaa
tgggtggcctctgctgctgatgatcacactgtaaagctgtgggatctgactgctgggaag
ttaatgtttgagtttacaggacacaccggcccagtaaacgttgttgaattccatcccaat
gagtaccttttggcttctggcagctctgacaggactgttcgattctgggacttggagaag
tttcaagttgtgagctgtattgaagaggaggccactcctgtcaggtgtgtgctcttcaac
ccggacggctgctgcctgtacagcggcttccaggattcgctgcgtgtgtacggctgggag
ccagagcgctgttttgatgtggtcttggtgaactggggaaaagtagctgacttgtctatc
agcaacaaccagctgataggagtttcctttgcacaaagcacagtctcttccttcgttgtg
gatctcagcagagtcccaaagtcagattctgttcctcatgggttgatcagggacgaccag
cctcttgtgccacccacccccacagggtcctcccttcgccgcatctatgacaggccctca
acgagctgcagcaagccacagagcagagtgaagcacaactcggagagtgagaggcacagt
cctagcagtgaagatgaccgggatgagaaggaatcaaaggctgagatccagaaccaggag
gattacaaagagatcttccagcccaagaatgcaatctgccgaacccctcctcgaaatgag
ccttttcctgcccctcctgaggatgagcctggaactgcaaaggaagcagtgaagcccagc
caagctgtggatgtccagacctcgctgccaaagcaggagctccctgatccagtccagagg
ccactgattgcctcctcaacttctttgagcagaacagagccatcagtgattcctgcagcc
aggaatgagcccattggactgaaggcctctgactttctcccagctgtgaagagccaaagc
cagactgagctggtggatgaggaggccatgtcccagatcaggaaaggccacgagaccatg
tgcgtggtgctcaccagccgccacaagaacctggacgccgtgagggctgtgtggagcacc
agtgacatcaagaactctctggactctgcagtggctatcaatgatctgtctgttgtcgtg
gatctcttgaatattgtcaaccaaaaagcgtctctctggaagctggatttgtgtactata
gtcctgccacagatagaaaaactactccaaagtaaatatgaaagttacgtgcagactggc
tgcacatccttgaaactcattctccagagattcctgccactcatcacagacatccttgct
gcaccaccttctgttggagtggacatcagcagagaggaaaggcttcacaaatgcaagttg
tgctacaagcagctgaagaacatcagtaacgttgtcaagaacaagtctgggctcagcggc
cgccatggtagtgcctttcgggaactgcttctcctcatggctgttctggactaa
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