Pyrgilauda ruficollis (rufous-necked snowfinch): 121348949
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Entry
121348949 CDS
T07608
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121348949 (PKD1L2)
04091 Lectins [BR:
pruf04091
]
121348949 (PKD1L2)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121348949 (PKD1L2)
Lectins [BR:
pruf04091
]
C-Type lectins
Others
121348949 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
Ion_trans
REJ
GPS
DUF7154
AGA2
UL45
PKD
Motif
Other DBs
NCBI-GeneID:
121348949
NCBI-ProteinID:
XP_041314907
LinkDB
All DBs
Position
Unknown
AA seq
2539 aa
AA seq
DB search
MTSQAFEEGSKKSGVLVSKTSGMHSTELRMWLWVTVLISHAVYLAVEEETDEGIPCSKYQ
QAFNHSCYEIVRLQQTFTGAQSWCEREGGHLVFIQNEETQKFLQKHIAEDQEWWIGLISN
SLLNETTDGSITWLDTSNIIYSNWYKDQPSHFSSMCGYILKNAKYQWGVTENCSQEFDFI
CEFESGQSIACDNSNATVQCGSGEVIQIEESFYGRKTPHYCVSETLQFERDEGCSWLNVK
DEVTGQCHGLQACQVAADGTFFGDPCPALGSYLSIQYHCKEGLQLIMKDTCFVFENITVT
LIWLLSPYSGNLSCTISTGDGHTIDPYYPLTLVSNITYRYSSPGEFTVFVECTTSEWHVM
AQRQVTVQDQEDQLSITGCYSQYGTGNSSRCQTLYGEDLWVQVQLSGGNGVTYSVLADNM
TLSESSAKEGLVPHNLTLSRASQELIGPGMHQLEIRASRSMMAPEISGTIAVHLIEPVSG
IQAAVASHTLQLGEDLEVNVSVSRGAPEKLMFEVTGSNRTQCHRADSPRGEPRTYGVPVP
WEGTAHRHLLRFQDITDEHRSHKESQHPGLGDSTFVVKVVAMNDFSNMSLDLGFITVLAN
SSHKKDSDKEEGSYKTNTRKKNDHKIYIKPSRHVDPFTTVTLGWPDRNNNSSFLWTCGAC
WPAWSECVKQQIILINQSEVQIPPSCLPPPKSAVTVRITVQNHGSEERQDEQCLYVTAKK
QELQLEIRCESNCKPVNVSDEVVLSVSGQEDSQAIYYNWYLDNTFQNKSTTLPLACGLTG
FRQNSLNLLQSNSSVLRMTSSFLQTQGEAFQIKVTAATQRGYGERWFLVSTVPPPEAPGC
AVSPGHGSVLTAFRVSCSAPSSEGSGQASPGRQLTYCFYVTPDSLLDCSPDPELFPVYLP
LGEEENNFIVHVKIVVSNNVGDTVQTNASVKVGPADMMDGNLTLQAVLSEKANTILKDGN
SSMSLFQLYKSVTSVLNQQIQEESFNMSLQTNTRKELRGLMLTTLSVVNITSMQTALKMS
EVLKEITYRSEELSVSAQVEASNTLRHVSASLLTVNTEHSRDGQELKEAANYLFNAVSSV
LKASVEMKAGNTSVPEAKQSSVSHQLLSTVENLQSALLFGKAPGDEPTVLSSPSATMYMH
RLQTLNMDSTSINISNSSSASFTLPPASSLNISGVDGETVDIRMVSFAMNPFFSSDSSFD
ISGTVGGLSLTGLDGLIIPVSNLKENIEIMLPRLSATQEDKILLNLGNYSTFQVNITSEN
TSIVIHLESEHDISLILYLGYGYHPNETNYDMKNHLFYKKTSGGDMNSWVLSPEELIFGE
GTYYFMVLQDMGVDSTVYNGLTINATCFASHCVFWDEHQKSWNSYGCHVGPKTNPSSTQC
LCNHLTFFGSSFFVIPNAIDVSKSAQLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKDI
QDNAKVKITVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLDGESEPHHLNDPD
TPVFERGGVDVFLLCTFFPLGELQSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCN
SWLAIDIGECVLDKVFPVATEQDMKQFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRA
QRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLL
IVQIFRNIRPRPAQQSREKKPGKNGRVSPSLPSTPEASQAASLTPEAVTKDIRRIANSLF
KALKTPSLTSAPDLEKSTNINSLLSLVEDVICQQNRAGQGFYDDSKKDGPIIVTLGAMDV
QEKTSPTPEKRICDQLKYSDYHRCLYLQLQHVEMELELLGPHKFQMPQSYTQAVCQVQHM
KNLLENQICSSASISEGWSHSPNLSSDNKKSSPRGLPWWFVFIAWFLVAATSSVSGFFTM
LYGLHYGKENSIKWLISMVISFLESLFITQPLKVLGFAAFFALVLKKVEHEDEENTAIDG
PLSAPGNCLQSDSHPLFGVRRDSRSNIYRPPPAADVEKMKISYMKEQKAFALIREILAYL
GFLWMLLLVAYGQRDPNSYYLNKHIEDSFTDGFHDVYSYQDFFTWANTTLLKNLYGSYKG
FITDGNSKLVGSARIRQVRVKGDTCPISPRLQHVVEECHAPYSLQTEDTSVYGEHWNTSA
LDNSSELSSAWQYQSQSKLRGHPSWGKLAIYSGGGYVIHLGTDPKNASRILQYLFNNVWL
DTFTRAVFVEFTVYNANVNLFCIISLMFESNALGAFFTSAELQSVRLYPYTDSLHIFVVA
AEVIYFLFIVYYMIVQGKLLKSLRWRYFHSKWNLLEMAIILISWSALSVFVKRTVLGTRD
ISYYQEHKEESISFSETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAW
GDISGFITVIAIMFLAYSIAANLIFGWKLYSYKTLLDSAETMVSLQLGIFNYEEVLDYNP
ILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKVFSFFGIK
CKKEEKLVTGEQLEQPVSE
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcaagcttttgaagaaggcagcaaaaagagtggtgtccttgtaagcaagacc
agtgggatgcatagcactgagctgagaatgtggctctgggtcacagttctgatttcccat
gctgtgtatttggctgtggaggaagaaactgatgaaggaataccttgttcaaaataccag
caagctttcaaccattcatgctatgagattgttagactccagcaaaccttcacaggtgcc
cagagctggtgtgagagagaaggagggcatcttgtctttattcaaaatgaggaaactcaa
aagttcttgcaaaaacatattgctgaggatcaggaatggtggataggactgatctcaaac
tccttgctgaatgaaactactgatgggtcaataacttggctggacacttcaaatataatc
tacagtaactggtacaaggatcagccgtctcacttctcatccatgtgtgggtacatcctg
aagaatgccaagtatcagtggggtgtgactgaaaattgcagtcaggaatttgacttcatt
tgcgagtttgaatctggccagagcatcgcttgtgataactccaatgccactgtacagtgt
ggatcaggagaagtgattcaaattgaagagagcttctacgggcggaagaccccgcactac
tgcgtgtcagagactctgcagtttgaaagagatgaaggctgcagctggctcaatgtcaaa
gatgaagtaacaggccagtgtcacgggctgcaggcctgccaggtggcagcagatggcact
ttctttggagatccttgtccagctttgggaagctatttgtctattcaataccactgcaag
gaaggtctgcagctgattatgaaagacacatgttttgtctttgaaaatatcacagtcact
ttgatctggcttctctcaccatattctgggaacctttcctgtaccattagcactggagat
ggtcacaccattgatccttactaccctctaacactggtcagcaacatcacatacaggtac
tcctctcctggggagtttactgtttttgtggagtgcaccaccagtgagtggcatgtgatg
gcacagaggcaggtgacagttcaggatcaggaggatcagctcagcattacggggtgctac
agccagtatggaacagggaacagctcccgctgccaaacgctctatggggaggacctgtgg
gtccaagttcagctcagtggaggcaatggagtaacctacagtgtgttagcagataacatg
acattgagtgaatccagtgcaaaggaaggtcttgttccccataacctgacactcagcagg
gcctctcaagagctgataggcccagggatgcatcagctggaaatccgagcatccaggagc
atgatggcaccggagatctctgggactattgctgtccatttaattgagccagtgtctgga
attcaggctgcagtagcttcccacactctgcagctgggggaggatttggaggtgaatgtc
tctgtgtcccgtggtgccccagagaagctgatgtttgaggtgactggatccaaccgaacg
cagtgccacagagcagacagccctcgtggggagccgcggacgtacggcgttcccgtgccc
tgggaaggtacagcacaccgacacctcctgcgcttccaggacatcacagatgagcacagg
tcacataaagagtcacagcatcctggcctaggggacagtacttttgtagtgaaagtggtg
gccatgaatgacttctcaaacatgagtctggatcttggattcatcactgtgttggcaaac
agctcccataaaaaagattctgataaggaagaaggcagctacaaaacaaatacccgaaag
aaaaatgatcacaaaatatatattaaaccaagtcgccatgtggatcctttcacaactgtt
acacttggctggccagacagaaacaataattccagttttctctggacctgtggagcttgc
tggcctgcctggagtgaatgtgtgaaacaacagataatcctaatcaaccaaagtgaggtg
caaatcccaccttcctgccttcctcctccgaaatcagcagtgactgtcaggattactgtc
caaaaccacggcagtgaagagaggcaggacgagcaatgtctctatgtgactgcaaaaaaa
caagaactgcaactggaaatcaggtgtgagtcaaactgcaagccagtgaatgttagtgat
gaagttgttttgagtgtctctggacaggaggactcccaggctatatattataactggtat
ttagataacacattccaaaacaagtctacaaccctccctctagcctgtggcctgactggt
ttccggcaaaactctttgaatttgctccaaagcaactcatctgtgttaagaatgaccagc
tccttcctgcagacacaaggagaagcttttcagattaaagtaacagccgcgactcagcga
ggctacggggagcgatggttcctggtgagcaccgtgcccccgcccgaagcccccggctgt
gccgtgagtcccgggcacggctcggtgctcaccgccttcagagtctcctgcagcgctccc
agctcggaagggtcgggccaggccagccctggcaggcagctcacgtattgcttctatgtg
acaccagattctctcctggattgtagcccggatcctgaactcttcccagtttatcttcca
cttggagaagaggaaaataattttattgtacatgtgaaaattgtcgttagcaacaacgtt
ggtgatacagttcaaacaaatgcttcagtgaaggttggacctgcagatatgatggacggg
aacctgaccctgcaggctgtgctatctgagaaggcaaacaccatcctaaaagatgggaac
agcagcatgagtctcttccaactgtacaagtcagtgacatctgtccttaatcagcagatc
caagaggaaagttttaacatgtctttacagacaaacacacgaaaagagctccgagggctg
atgctgacaacactctctgttgttaacataacatcaatgcagactgctctgaagatgtca
gaggtattgaaagaaatcacttacaggagtgaagagctgtctgtctcagcacaggtggaa
gccagcaacactctgagacatgtcagtgcctccttgctcactgtaaacacagagcacagc
agagatggtcaggagttaaaggaagcagccaactatctgtttaatgcagtgagtagtgtt
cttaaagcttctgtagaaatgaaagctgggaacacttcagtgccagaggcaaaacagagt
tcagtgtcacaccagctcctgagtacagttgaaaatctccagagtgcccttctgtttggg
aaggcaccaggtgatgagccaacagtcctcagctctccctctgccacaatgtacatgcac
agattacaaacactaaacatggatagcacatccattaacatctccaattccagctctgcc
agctttactctcccacctgcttcctctctcaatatttcaggagttgatggtgaaacagtg
gatataaggatggtgagctttgccatgaatccctttttctccagtgacagcagttttgac
atcagtggaacagtgggaggtctaagtctcactggtctggatggtttgatcataccagtc
agcaacctcaaagagaacattgagatcatgttaccaaggctttcagcaactcaggaagat
aagattctgttgaatctgggcaattatagcacttttcaagtcaatattacctcagaaaac
acatctatagtgattcatctggaatctgaacatgacatttcactaatactttacttgggg
tatggttatcacccaaatgaaaccaactatgatatgaaaaatcatctgttctataagaaa
acttctggaggtgacatgaacagctgggttctcagcccagaagaactcatttttggagag
ggaacctactatttcatggttttacaagatatgggagtagattcaacagtctacaatggg
ctaaccataaatgccacttgctttgcatcccactgtgtattttgggacgagcaccagaaa
agctggaacagctatggatgtcatgtaggaccaaaaacaaatcctagcagcacacagtgc
ctctgcaaccatctgaccttctttgggagctccttctttgtcatacccaatgccatagat
gtcagcaaatcagcacagctgtttggtacatttgtggacaatcctgtggtggtgacaact
gtaggatgcatttttctgatatatgtgcttgtagttatttgggctcgaaggaaagacatc
caggataatgccaaagtgaaaatcacagtcctggaagacaatgacccctttgctcagtat
cgttaccttgtgacagttttcacaggacaccgccgtggtgcagccacaacctccaaggtg
actctcaccctctatggactggatggagagagtgagccccaccatctaaatgatcctgat
acaccagtctttgaacgtggaggagtggatgttttcctcctctgtaccttctttcctctt
ggggaactacagagtattagactgtggcatgataattcaggggacagtccatcctggtat
gtgaatcgagtattagtccatgacctggcatgggatcagaaatggtacttcctctgtaac
tcttggctagccattgatattggagaatgtgtcctagataaagtgttcccagtagcaaca
gaacaggacatgaagcagttcagcaatctgtttttcatgaagacctccaagggtttccag
gatgggcacatctggtactcagttttcagccgctcccctcgaagctccttcacacgagcc
cagcgtgtgtcctgttgcttctcactgctgctctgcaccatgctgaccagcatcatgttc
tggggtgtgccaaaggatcctgctgagcagaaaatggatttgggtaagatcgagttcaca
tggcaggaagtgatgattggctttgagagctctctcctcatgttccccatcaacctgctc
attgtgcagatcttcaggaacatacgaccccggccagcccagcagagcagagagaagaag
ccggggaagaatggccgagtgtccccaagcctgccttccactccagaggcctcccaggct
gcctctctcactccagaggctgtgacaaaggacataagaagaattgccaactcactcttt
aaagccctgaagactccatctctcacctcagcaccagaccttgaaaaatcaactaatatc
aactcactcctgtcactggttgaggatgtcatctgtcagcagaacagagctgggcaaggg
ttttatgatgacagcaagaaggacggccctataattgtcacattgggtgctatggatgtc
caagaaaaaacaagtccaactccagagaagagaatttgtgaccagctgaaatacagtgat
taccatcgttgcttgtacctgcaactccagcatgtagagatggagctggaattactgggg
ccccataaatttcagatgcctcagagttacacacaagctgtttgtcaggttcagcacatg
aagaacctcctggagaaccaaatctgttcatcagcatccatcagtgaagggtggtcccat
agtccaaacttgtccagtgataacaagaaaagttctcctagagggctgccctggtggttt
gtgttcattgcttggttccttgtggcagccaccagcagtgtgtccgggttcttcaccatg
ctctacggactccattacggcaaggagaactccatcaagtggctcatctccatggtcatc
tccttcttggaaagtcttttcatcacacagcccttaaaggtgctgggatttgctgctttt
tttgctctggttctgaagaaggtggaacatgaggatgaagaaaacacagctattgatgga
cctttatctgcaccaggtaactgcctgcaaagtgattcacaccctctcttcggggtcaga
agggacagtagaagcaacatttaccggccacctcctgcggctgatgtggagaaaatgaaa
atcagctacatgaaggagcagaaagcatttgccctcatcagagaaatcctggcctatctg
ggttttttatggatgctgttactggttgcctatgggcagagagatcccaattcctactat
ttaaacaaacacattgaagacagctttacagatggattccacgatgtctacagttaccag
gatttcttcacgtgggcgaacactactttactcaaaaatctttatggatcttataaagga
ttcattacagatggcaattccaagctggtgggtagtgctcgaattcgccaagtaagagtg
aaaggagacacctgccctatttctcccagactccagcacgtagttgaggaatgccatgct
ccatactccttacagacagaagatacatcagtttatggggagcactggaatacctcagcc
cttgataactcctctgagttgagctcagcatggcagtatcagagtcagtccaagctgaga
ggacaccccagctggggtaaacttgccatctacagcggagggggatatgtgattcacctg
ggaactgaccctaaaaacgcctccagaattctccagtaccttttcaacaatgtctggctt
gacaccttcacaagagcagtgtttgttgaatttacagtctacaatgccaacgtgaacctg
ttctgcattataagcctgatgtttgaaagcaatgctttaggggccttcttcacaagtgca
gagctgcaaagtgtccggctgtacccctacaccgacagcctccacatctttgtggttgca
gcagaagtcatttatttcctcttcattgtgtactacatgatagtacagggaaagctgctg
aagagtctgagatggagatacttccacagcaagtggaatctcctggagatggccattata
ttgattagctggagtgctctgtcagtgtttgtgaaacggacagtccttgggaccagggac
atcagctactaccaggaacacaaggaggagtccataagcttcagtgaaacagcaagagct
gatgcagttcttggctacctgattgcattcctggtgcttctctccacagtgaaactgtgg
catctgctgaggctcaaccctaaactgaacatgatcacttcaactctaaggagggcatgg
ggtgatatctctggattcatcactgttattgcaatcatgttccttgcctattccattgct
gcaaatctgatatttggctggaagctctactcttacaaaaccctccttgattcggcagag
accatggtcagtcttcagctgggaatcttcaactatgaggaggtcttggactacaatcca
attttaggctccttcttaattggatcctgcatcatttttatgacatttgtggtactgaat
ctgttcatttcggtgattctggttgcttttagtgaggagcaaaagcattaccaggcttca
gaagaagaggagattgttgatctaatgctaatgaaagtcttcagtttctttgggataaaa
tgcaagaaggaagagaagctggtcactggcgaacaactggagcaacctgtcagcgagtga
DBGET
integrated database retrieval system
