Pyrgilauda ruficollis (rufous-necked snowfinch): 121348968
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Entry
121348968 CDS
T07608
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121348968 (TDRD12)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
121348968 (TDRD12)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121348968 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
EFhand_Ca_insen
ERCC3_RAD25_C
KH_PARP14_6
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
121348968
NCBI-ProteinID:
XP_041314929
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEVVVLKVEDPNCFWIAVKECVPGVAGETVYQNLNAEMDQFYNSYKDAEQVKQEEIKKGQ
VYVVFSEELKCWCRALVESVRCQADGYQLGCFLVDYAKYCSVPSENIRVLAEAFAKIPDR
AKKCRLYCTKPLTLHIDYCENTAKIGPAKRWDTAAIHHFRKLLEEATEVKATIQTVEDKL
LEVFLFVTIRDEKICVNDDLVAKHFAHYKEDEGTAGSSSDVSDDEVSLNAECVPVEFVGP
TFLARPKLPFGEEVSPHLGPGLAGCNSVLEKPSQRSHTDLNDKTMPVVSMVPGLPPKEDK
AVQTERLPQFLNSNFLQTHTVEDDQQSFQNVGKEKNFVLLSKKIEPSSLLETAPLFDGLK
KELAWNKFSGPTFTQSYCWPPVAGGCDVVTISHQGNDPLLYIPPVLTLLQESDYEALPNM
SGTLALIICPGWKKAQLVFDLLKTYRKGCRHLHPMLIILGQNKEAASQMEIRGCEVVVTT
PHNLLRLLEHNTGFLCRLCHLVLDEVDVLFSDTCEQVFTILDCYKKATAQTQGNRPHQII
AVGTQWNKHITLLIKEFMNDPHIVITVIEEAAIFGNVQQVVQPCMNSNRTAELLKILDFS
QRNLQKVLVFTDSVTEVEMIHKALKSNSIVSLKKHKESKCNAKCVLERWRKMHSSGTPAV
LVLTDDCQQSLGITDATWVIHFSFPSPAVFGQRLQSMSDNFSTGIKDSAVGEEDLKAKSV
ILLTENSSCHAPGILYYLKHAEVEIPEELYDLTARVQESEEDETFSRPLCAALKTFGLCR
NGTECPDRHKVNLSIDMAQNSAAEMIETPERVTILPLFIVHATNYFGRIIKKQKDQYTVL
TKEMNDYFKVPGHRISVNSVEKSVFYVLREGAICHRVQVVETPAKDEENVCKVTVKYIDE
GRTSQVNSDQLLHLPVKFQSLPPQAVEIIVCRVKPIDNEVEWNPKVTDHINHKIKGKFHH
AKVVHTLGKTVWVDPMVGVTSLPTMKMWINEYNIRSEILSTGLGTDNPEHVGEIQKLCTQ
IPVLDHAESLEHLIGDYVVQTEEAEDSSVHQQKGCHPPIKWFQDDVSVTLKVQILRATDS
KCEFSREKVTFSAYSEGKLYVADLELYQSLIAEKSTCVIKDTEAVIFLVKEKKGTWCKLL
KNKNVHVSLDFERWEESEDERPFTVGSGKLTYPPAGSEEWFESSEDSDTESDE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgtggtattaaaggttgaggatcctaattgcttttggattgctgtgaaagaa
tgcgtgcctggtgtagctggtgaaactgtgtatcaaaacctgaatgctgaaatggaccag
ttttataacagttataaagatgcagagcaagtaaaacaagaggaaataaaaaaaggccag
gtttacgtggtgttcagtgaggaactgaagtgctggtgcagggctctggtcgagtcagtc
cggtgccaggcagatggttaccagctcggctgtttccttgtggattatgccaagtactgc
tctgttccatcagagaacattcgagttttagcagaagcatttgcaaagatcccagacaga
gcaaagaagtgtcggctatactgcacaaagccactgacactgcacattgactactgtgaa
aacactgccaaaataggaccagccaaaagatgggatactgctgctatccatcattttcga
aagcttcttgaagaggctaccgaggttaaagccacaatacagacagtagaagataaactg
ttagaggtgtttctttttgtgactataagagatgaaaagatctgtgttaatgatgatctg
gttgcaaagcactttgctcattacaaggaagatgaagggactgcagggagttcttcagat
gtttctgatgatgaagtgtccttaaatgctgagtgtgttccagtggagtttgttggtcct
acgtttcttgccaggccaaaactgccctttggggaggaggtgtcaccacatcttgggcca
ggtcttgctggttgtaattctgttcttgaaaagccatcccaaaggtctcatacagatcta
aatgacaagactatgcctgtggtcagcatggtgccaggtttgcctcccaaggaagataaa
gcagttcaaacagagaggcttccacaattcttaaattctaatttccttcagacacacaca
gttgaagatgatcaacagagttttcagaatgttgggaaagaaaaaaacttcgtgctcctg
agcaagaaaattgaaccatcatcacttttggaaacagcaccactttttgatggtctgaaa
aaggaacttgcttggaacaagttttcaggccctaccttcacccagtcctactgttggcca
ccagtagctgggggatgtgatgttgtgaccatctcccatcagggaaatgatcccttatta
tatattccaccagttcttacccttttgcaggaaagtgactatgaagccttgcccaacatg
agtgggacactagcactgattatatgtcctggatggaagaaggcacaacttgtttttgac
ctgctgaaaacatacaggaaaggctgcagacaccttcatccaatgctgataatccttggg
cagaacaaggaagcagccagccagatggaaatccgaggttgtgaagtagtagtgactaca
ccacacaacctcctgaggctgctggaacataacactgggttcttgtgtaggctttgccat
cttgttctggatgaggttgatgtgctgttctctgacacttgtgaacaggtgtttactata
ctggattgttacaagaaagccactgctcagacacaggggaatcgaccacatcagatcatt
gctgtgggaactcagtggaataaacatatcacactcttgataaaggagttcatgaatgat
cctcacattgtgataactgttattgaagaagctgccatctttggaaatgtgcaacaggtg
gtgcaaccctgcatgaacagcaacagaactgctgagttactcaaaatcctggacttttcc
cagaggaatcttcagaaagtgctggtcttcactgactcagtaactgaagtagagatgatt
cataaggcactgaagagcaactcaatagtttccttgaaaaagcataaagagagcaagtgt
aatgcgaagtgtgtcttggagaggtggagaaaaatgcacagttctggcactcctgctgtg
ttagttttaacagatgactgccagcagtccttgggaatcacagatgcaacttgggtgatc
catttcagtttcccatctccagcagtctttgggcagcgcctgcaaagcatgagtgacaac
ttcagcactggcataaaggattctgctgtaggtgaggaagatctgaaggccaagtcagtc
attctgctgacagagaacagttcctgtcatgcacctgggattctctactatttaaagcat
gcagaagttgaaatcccagaagaactctatgatttgactgctagggtgcaggaatctgag
gaagatgagacattttcaagacctttgtgtgctgctcttaaaacatttgggctttgcagg
aacggaacagagtgtccagatcgtcataaagttaatttatcaatagacatggcccagaat
agtgcagctgaaatgatagaaacacctgaacgtgtgacaatcttgcctctcttcattgta
catgcaacaaactactttggtcgaataatcaagaaacaaaaggaccaatacacagttctt
actaaagaaatgaatgattacttcaaggtaccaggacacaggatttctgttaatagtgtg
gagaagtcagtgttctatgtgttacgtgagggtgccatttgccacagggttcaagtggta
gagactccagcaaaagatgaagaaaatgtctgtaaggtcacagttaaatacatagatgaa
ggcaggacaagtcaagtgaacagtgatcagctgcttcacttacctgtgaagtttcagagt
ctgccacctcaggctgtggaaattatagtttgtagagtaaaacccatagataatgaagtt
gaatggaatccaaaggtgactgatcacattaatcacaaaattaaaggaaaatttcatcat
gcaaaagtggtgcataccttgggaaagacagtttgggttgacccaatggttggggttacc
agtcttcccacgatgaagatgtggatcaatgagtacaacattcggtctgagattttgtcg
acgggtttgggaaccgacaatcctgaacatgtaggagaaattcagaagctgtgcacacag
ataccagttttggatcatgcagagagcttggagcatttgataggagattatgtagttcaa
acagaagaagcagaagactcttctgtgcatcagcagaagggctgtcatccaccaatcaag
tggtttcaagatgatgtgagtgtgacactgaaggtacaaatactgagggcaactgacagt
aaatgtgagttctctagagaaaaggtgactttcagtgcttattcagaaggcaaactctat
gtggctgacctggagctctatcagtcactaattgcagagaagtccacatgtgtgattaag
gatacagaggctgtgatttttctggtaaaagagaaaaaagggacatggtgcaaattactg
aagaacaagaatgttcacgtgtccttagattttgaacgctgggaagagtctgaagatgaa
aggccttttacagttggttctggaaaactgacctaccctcctgcaggatctgaggagtgg
tttgagtcctcagaagacagcgatacagaaagcgatgagtaa
DBGET
integrated database retrieval system
