Pyrgilauda ruficollis (rufous-necked snowfinch): 121349117
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Entry
121349117 CDS
T07608
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121349117 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121349117 (CSTF2)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
121349117 (CSTF2)
U7-dependent histone pre-mRNA processing factors
121349117 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121349117
NCBI-ProteinID:
XP_041315152
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPLAPGGGMQPQVGMPGAGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
VGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEP
RGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGG
FSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggatcggtccctgcgctccgtgttcgtg
gggaacatcccgtatgaggccacggaggagcagctgaaggacattttctcggaggttggg
cccgtggtgagctttaggctggtgtacgacagggagacgggcaagcccaagggctatggc
ttctgcgagtaccaggaccaggagacggcgctgagcgccatgcgcaacctcaacgggcgc
gagttcagcggcagggccctgcgcgtggacaacgccgccagcgagaagaacaaggaggag
ctcaagagcttgggcacaggtgcacccatcatagagtcaccctacggggaccctgtcaac
ccagaggatgcccccgagtccatcagccgggcagtggccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtccagaacagcccccaggaagccaggaac
atgctgctccagaacccccagctggcttatgcgctgctgcaggcccaggtggtcatgagg
atcgtcgacccggagatcgcgctgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcaggcagtgccagggccagggcctgggccaggaccggggcctggg
ccgggccccaatgcgcagctgaacccacagaacaccccatcgtcccagccacagcccata
ggcgggatgcacgtcaacggcgctcctcctctgatgcagccacccatgcaggggggagtg
ccagccccaggacagatggcagcccctgtgcagggcccaggccctggccccttggctcca
ggaggtgggatgcagccacaggttgggatgccaggtgcagggccagtccccttggagcgt
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcga
gtcggaagagatccccgcgggctggagccacgagggctggagccacgagggctggagccc
cgggtgatggaggcgcgggcgctggaggcgcgaggcctggagccgcgggtcctggagcca
cgagtgctggaggccagggccatggaggccagggtcctggagccccggggcctggagcct
cgagggcccggtcccaacccgcgtggcccgatgcctggtgggatacagggtcctgggcca
cttaacatgggagccagtggcccgcaggggccccgccaggttcctaacatggctggggca
ggcatgcagggaggaggcatacctggggcaggagtccaaggagctggtcagcctggaggc
tttagccctggacagagccaggtcacgccccaggatcacgagaaggcagcactgatcatg
caggtcctgcagctgacagcagaccagattgccatgctgcccccagaacagcggcagagc
atcctcattctgaaggagcaaatccagaaatccacaggggcaccctga
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