Pyrgilauda ruficollis (rufous-necked snowfinch): 121349164
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Entry
121349164 CDS
T07608
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121349164 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121349164 (DHX15)
03009 Ribosome biogenesis [BR:
pruf03009
]
121349164 (DHX15)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121349164 (DHX15)
Spliceosome [BR:
pruf03041
]
Complex A
U2 snRNP components
U2 related factors
121349164 (DHX15)
Complex B
121349164 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121349164 (DHX15)
Ribosome biogenesis [BR:
pruf03009
]
Eukaryotic type
90S particles
Helicases
121349164 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
121349164
NCBI-ProteinID:
XP_041315275
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PTSNSTYYASAGLPAIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgatctcggcgacgattacagctccagcaagaaacgcacc
accgacgggaaagatcgggaccgggacagggaccgagatgaccgttccaaagatcgggac
agggatcgtgacagagatagagatcgtgacagagagagggacaaggaaaaagatctgcga
cctacgtccaactctacttattatgcatctgctgggctaccagctataaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacataccccacgatattatgatatc
ctgaaaaaaaggctacagcttcctgtctgggaatataaggagagatttacagatattttg
attaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcaatggtgtgttgactacatgcgctcgttacctggcccgaagaggggagtggcatgc
acccagccccggcgagtggctgcaatgagcgtggcacagcgcgttgctgatgagatggat
gtcatgctgggccaggaggttgggtactccattcggtttgaagattgcagtagtgcaaaa
accattctgaagtatatgactgatggtatgttgcttcgtgaagcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccacgagagaacactggctacggat
atcttgatgggagttttgaaggaagttgtgagacaaagatctgatctgaaggttatcgtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttcta
actatcccgggtcgcacccatcctgtggagatattctatactccagaacctgaaagggac
taccttgaggctgccattcgaacagtgatacagattcacatgtgtgaagaagaagaagga
gatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgacttaggtcctgaagttggtgacataaaaatcattccattgtattcc
acccttcctccacagcaacagcaaagaatatttgaacctcccccaccgaaaaaacaaaat
ggagcaataggacgaaaggttgtggtgtccactaacattgctgagacgtcattgacaata
gatggcgtagtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcctcgt
atcagagtggagtctctgctggtgactgccatcagtaaagcgtctgcccagcagcgggct
ggccgtgctggtcgtactcgaccaggcaagtgcttcaggctttatacagagaaagcctac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttaaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccattagatccacag
ctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagattttaccagtcgggactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacagggcattac
ttaacagtaaaagataaccaggtggtgcagttgcatccctccactgttcttgatcacaaa
ccagaatgggtgctgtataatgagtttgtccttacaacgaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcatcgccaaacttcagtccaag
gaatactcacagtactga
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integrated database retrieval system