Pyrgilauda ruficollis (rufous-necked snowfinch): 121349186
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Entry
121349186 CDS
T07608
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04137
Mitophagy - animal
pruf04140
Autophagy - animal
pruf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121349186 (HIF1A)
04137 Mitophagy - animal
121349186 (HIF1A)
04148 Efferocytosis
121349186 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121349186 (HIF1A)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121349186 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
121349186
NCBI-ProteinID:
XP_041315324
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMR
KLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFELTGH
SVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWK
VLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDM
KFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAK
QGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMK
MTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYN
DVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELSFTMP
QVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAIDTEAKNPFST
QETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSPSSQSAASMPLFQQGQAAVGSSEEA
KPAEHADEVKTGIMVPSSPARGGPEAGSAPASPYSSRSRTASPIRAGKGTVDQVEKPSPG
APSLLAVTLNERSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTGDRGG
NASLAWKRVKGCKTNGHSGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPI
QGNRNLLQGEELLRALDQVN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaggattagctctgaacgcaggaaagagaagtcgagggatgcagcccggtgcaggagg
agcaaggagtcggaggtgttctatgagctggcccaccagctgcccctgccccacaccgtc
agcgcccacctggacaaggcatccatcatgaggctcaccatcagctacctgcgcatgagg
aagctgctggatgctggtgagctggagacagaagccaaaatggagaaggaactgaactgt
ttctacttgaaagctcttgatggctttgtcatggttctgtctgaagacggggacatgatt
tacatgtctgaaaacgtgaacaagtgtatgggactcactcagtttgagttgacggggcac
agtgtatttgatttcacacatccatgtgaccacgaggagctgagagaaatgctgacacac
agaaatggtcctgtgaaaaagggcaaagagcaaaacacggagcgcagcttttttctcaga
atgaagtgtacactgactagcaggggaagaacagtgaatataaagtctgctacatggaag
gtgctgcactgcactggccacatccgtgtgtacgacacgtgtgggaaccagactcactgt
gggtacaaaaagcctcccatgacctgcctggtgttgatctgtgaacctattcctcaccca
tcaaacattgaggtccccctggacagtaaaacgttcctcagtcgtcacagtcttgatatg
aaattttcctattgtgatgaaagaattacagagttgatggggtatgagccagaggagctc
ctgggtcgctcaatctatgagtactatcacgcactggattctgatcatctgaccaaaaca
caccatgacatgttcacaaaggggcaggtgacaacaggacagtacagaatgctggccaaa
caaggtggctatgtctgggttgaaactcaagcaactgttatatacaacactaagaattct
cagccacagtgcatagtgtgtgtgaactatgtgttgagtggaattgttcagaaggactta
attttttcccttggacaaactgagtgtatgctgaaaccagtggagtctcctgacatgaaa
atgaccaaaatattcagtaaagatgacctggatgataccaacagcctatttgaaaaactt
aaacaggaaccagatgctttaactgtgctagccccagctgctggagacacaattatctct
ctagatttcagcagtaatgagtctgatgaacaacaatgtgatgaagttcctttgtataac
gatgtaatgctcccctcatccagtgagaaattgcagaatataaatatggcaatgtcccca
ctacctgcctctgaaactacaaagccacttcgtagcaatgctgatcctgcactcaataga
gaagttgtatcaaagctggagccaaacacagagccactcgaactttcttttaccatgcct
caggtgcaagaacaaccaaccagcccttctgatgcaagtaccagccaaagttcacctgag
cccagtagtcccaacgactactgctttgatgtggataatgatatggccagtgaattcaaa
ctggaattagtggagaaactctttgccatagatacagaagcaaaaaatccattctctact
caggaaaccgatttagatttagagatgttggctccttacatcccgatggatgacgacttc
cagctgcgctccttcgatcagctgtccccgctggagagcagctcccccagctcccagagc
gcagccagcatgcccctgttccagcagggccaggcagcagtgggcagctcggaggaggcc
aagccggcggagcacgcggacgaggtgaagacggggatcatggtcccttcctcgcccgcg
cgcgggggccccgaggccggcagtgcccccgcctcgccctactccagcaggagtcgaact
gcctctcccatcagggcagggaaaggaacggtggatcaggtggaaaaaccttctccagga
gcacccagcttgctagcagtcactctgaatgaaagatctactgcactggatgaagaacta
aatccaaagatgctagctttgcataatgctcagagaaaacgaaaaatggaacatgatggt
tcactttttcaggcagttggaattgggtctttattccagcagacaggtgaccgtggagga
aatgcatcacttgcttggaaacgtgtaaagggatgcaaaacaaatggtcacagtggagtg
gagcaaaagacaatcattctactatcaactgacatagcaagtaaacttctagggcagtcg
atggatgagagtggactcccccaactcacgagttacgactgcgaagtaaacgctcccata
cagggcaacagaaacctgctacagggggaagaactgctcagagctctggatcaagttaac
tga
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