KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121349305
Entry
121349305         CDS       T07608                                 
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pruf03019]
    121349305
   04121 Ubiquitin system [BR:pruf04121]
    121349305
Enzymes [BR:pruf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121349305
Messenger RNA biogenesis [BR:pruf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121349305
Ubiquitin system [BR:pruf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121349305
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 Prok-RING_4 KH-I_KHDC4-BBP RING_XB3-XBAT31 zf-C3HC4 KH_DEAH11_2nd KH_2 zf-RING_UBOX
Other DBs
NCBI-GeneID: 121349305
NCBI-ProteinID: XP_041315504
LinkDB
Position
Unknown
AA seq 504 aa
QGKGSSGISVGHSGGRLACRTAPWRSPPSGGTRGAGSGCRGSAAGTAGGLLGALLSCSRE
LSPPSLPGVGLWLPAAGGSGARRAVLPAVGRPPTRRVSCTGCKIKALRAKTNTYIKTPVR
GEEPVFVVTGRKEDVATAKREILSAAEHFSLIRASRSKGAGPGGLCRPPALPGQTTVQVR
VPYCVVGLVVGPKGSTIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEMHVA
VRTGTFPELGHHSDFRANGTDVGFEGGPAWPGARPAPRARSRMFSSYRNDSSSSLGSGST
DSYFGSSRLADFSPTSPFGTGGFWIGEALPAVGTEELALDSPAYEPLPAPSPTIWAPFEP
AATLSGLAGEAVGGTNAPCHGSQPPTPRLSPTFSESLEHPLARWACSDPPGSGHQPELPV
YIPAFSNGTNSYSSSNGGSTSSSPPECRRRHDCVICFESEATAALVPCGHNLFCLQCAGQ
ICARDTPACPMCQTAVTQAIHIHS
NT seq 1516 nt   +upstreamnt  +downstreamnt
gcaggggaaggggagctcaggaatctctgtgggacactcaggaggacggctggcatgtag
gacggccccgtggcggtcaccaccgagcggtggcactcggggcgctgggtcaggctgccg
gggcagtgctgccggcacagcgggcggcttgctcggagccctgctgagctgcagccgcga
gctgtccccgccgtccctgcccggcgtggggctctggctccccgcggctgggggctctgg
ggcgcggcgggcggtgctccctgccgtgggccgcccgccgacccggcgtgtttcctgcac
aggctgcaagatcaaggcgctgcgggccaagaccaacacgtacatcaagacgccggtgcg
cggcgaggagccggtgttcgtggtgacggggcgcaaagaggacgtggccacggccaagcg
ggagatcctgtcggcggccgagcacttctcgctgatccgggcgtcgcgcagcaagggcgc
ggggccgggcgggctgtgccgcccgcccgcgctgccggggcagaccacggtgcaggtgcg
ggtgccgtactgcgtggtggggctggtggtgggccccaagggctccaccatcaagcgcat
ccagcagcagacgcacacgtacatcgtgacgcccagccgcgacaaggagcccgtgttcga
ggtgacgggcatgcccgagaacgtggaccgcgcgcgcgaggagatcgagatgcacgtcgc
cgtgcgcactggcaccttcccggagctcggccaccacagcgacttccgcgccaacggcac
cgacgtcggcttcgagggcggccctgcctggccgggtgcccgccccgcgccccgtgcccg
ctccaggatgttctccagctaccgcaacgacagctccagctccctgggcagcggctccac
cgactcctacttcggcagcagccggctggccgacttcagccccaccagccccttcggcac
cggcggcttctggatcggggaggcgctgccggccgtgggcacggaggagctggcactgga
ctcccctgcctacgagcccctgcccgcgccctccccgaccatatgggcgccctttgagcc
cgcggccaccctgtctggcctggccggcgaggccgtgggtggcaccaacgccccgtgcca
cggcagccagccccccacgccccgcctgtcgcccaccttctccgagagcctggagcaccc
gctggccaggtgggcctgcagcgacccgccgggctccggccaccagcccgagctgcccgt
ctacatccccgccttctccaatggtaccaacagctactcctcgtccaacggcggctccac
gtccagctcgccccccgagtgccggcgcaggcacgactgcgtcatctgcttcgagagcga
ggccaccgccgccctcgtgccctgcggccacaacctcttctgcctgcagtgcgccggcca
gatctgcgcccgggacacgcccgcctgccccatgtgccagaccgcggtcacccaggccat
ccacatccactcctga

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