Pyrgilauda ruficollis (rufous-necked snowfinch): 121349355
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Entry
121349355 CDS
T07608
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121349355 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121349355 (NUP54)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121349355 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
121349355
NCBI-ProteinID:
XP_041315589
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MAFNFSATAGAGAANPTGAFGGFGTTTTTAAPAFSFSAPTNTGTGGLFGGTQNKGFGFGT
SFGTGTGTGLGSGLGTGLAFGGFGTQQQQQQQTTLGTGLFNQPAQAPAQSNQLINTASAL
SAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNN
KDEDGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIYI
VERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGV
DPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKN
QTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAP
TQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDD
LEDIKLIEHGLNESIPIRGGVFS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcagcgccacggcgggagccggggccgccaacccgaccggtgccttc
gggggctttgggaccaccaccaccaccgcggcaccggcgttcagcttctctgctcccacc
aataccggcaccggcggactctttggtggtacccagaacaaaggctttggatttggtacc
agttttggcacaggaactggaactggcttgggtagtgggctgggaactgggctagccttt
ggaggctttggaacccagcagcagcagcagcagcagaccacgttaggcaccgggttgttc
aaccagcctgcccaggcacccgctcagtccaaccagctcatcaacacagccagcgccctc
tcggccccgacactgctgggagatgagagggatgccattctggccaaatggaaccagctc
caggccttctggggcacgggcaaagggtacttcaacaacaacatcgctcccgtggagttc
acgcaggaaaaccccttctgcaggttcaaggctgtgggttacagtttaatgcccaacaac
aaagatgaagatggcctcgtggtcttggtgtttaacagaaaagaagcagatattcgaagc
cagcagcagcagctcgtagaatcactacacaaaattttggggggaaaccagaccctcact
gtcaatgttgaaggtgttaaaacgatgcccgatgaccagacagaagtgatcatttacatt
gtggagcgctcccccaatggcacctcgaggagagttcctgcaacgaccctctacgcccac
tttgagcaagccaacatcaaatcatccctgcagcagctgggggtcagcctgtccatggcc
aggacagagctgtccccagcacaagtcaagcagctcctgcagaaccctcctgccggtgtt
gatcctattatatgggaacaagccaaagttgataatcccgatcctgataagcttattcct
gtgccaatggtgggtttcaaggaactgctgagaagattgaaggtccaggatcagatgacc
aaacagcatcaaactcgattagatataatatcagaagatatcagcgagctgcagaaaaac
caaacgacaactatggcaaaaattgcacagtacaaaaggaaactgatggcgctttcgcac
agaaccttgcaggtgctaataaagcaggaaatccaaaggaaaagtggttatgccattcaa
gcagatgaggagcagcttcgtgtacagttggataccattcagtgtgaacttaacgcaccc
acgcagttcaagggcagactgaatgagctcatgtcccagatcaggatgcagaaccacttc
ggagcagtgcgggctgaggagcgctattacatagatgcagacctcttaagggaaatcaaa
caacacctgaagcagcagcaagaagggctgagtcacctaatcagcatcatcaaggatgac
ttggaggacatcaagctaatagaacatgggctgaacgagagcattcccatccgaggggga
gtcttcagttga
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