KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121349387
Entry
121349387         CDS       T07608                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03420  Nucleotide excision repair
pruf04115  p53 signaling pathway
pruf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121349387 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121349387 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    121349387 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pruf04121]
    121349387 (DDB2)
   03400 DNA repair and recombination proteins [BR:pruf03400]
    121349387 (DDB2)
Ubiquitin system [BR:pruf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121349387 (DDB2)
DNA repair and recombination proteins [BR:pruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      121349387 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Aladin EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_Gbeta Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd WD40_RFWD3 PEP5_VPS11_N Beta-prop_Vps41 Frtz
Other DBs
NCBI-GeneID: 121349387
NCBI-ProteinID: XP_041315639
LinkDB
Position
Unknown
AA seq 462 aa
MAPVNQPKDKKRERTCQHWPEEAKSAGKRKRDYGERGNEKQEKKLFVRKTSKPSGKIGCS
GAGFVMRNKRVLSSQLERRCSIVHYVYQKMLGGSIQAQLRQRLELAFLHSLSSYCLFRRA
SPFDRRVTCLEWHPTHPSTLAVGSKGGDIILWDCEVLDKTCFIKGKGPGDSLGDIKFSPY
EAEKLYVASGDGTLSLQDLEGRAVQVISRALDCGHEHHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEVWKLKLHKKKVTHVEFNSRCEWMFATASVDQTVKIWDLRNIKNKTN
FLHLLPHEKPVNAAYFSPTHGAKLLSTDQHNEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVVGRYPDPKFPGYTLNELRTVDVFDGNTGEMVCQLYDPNASGIISLNK
FNPMGDTLASGMGFNILIWNQEEMAAKKHEHLLKAMTNEIEP
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggctccagtgaaccagccaaaggacaagaagcgtgagaggacatgtcagcattggcca
gaagaggcaaaatcagctgggaagaggaaacgggactatggagaacgagggaatgagaaa
caagagaagaagttgtttgtgaggaaaacatctaaaccctcagggaaaatcggttgcagt
ggagctggatttgtgatgagaaacaagagagtcctctcctctcagctggagcggcgatgc
agcattgttcattatgtctaccagaaaatgctgggaggctccattcaggcacagctcagg
cagagactggagctggcttttctgcattctctttcctcatactgcctctttcgaagagca
agtccctttgacaggagagtgacatgtctggaatggcacccaacccaccccagtacgcta
gctgtcggttccaaaggtggagacatcatcctttgggactgtgaagtacttgataaaacc
tgcttcataaaggggaaagggccaggagattctctcggagacatcaagttcagtccttat
gaggcagagaagctttatgtggcatcaggtgatggcaccctaagtctgcaggatcttgag
ggcagagcggtgcaggtgatctctcgtgccctggactgtggccatgagcatcataatgtt
tgttgctggtactgcagtgtggacgtttctgcaagctgccgtgcagtggtgacaggtgat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagaggtctggaagctgaaattg
cacaagaagaaagtgactcatgtagagtttaactcccgatgtgagtggatgtttgccaca
gcatctgtggatcagacggtcaaaatctgggacctcagaaacatcaaaaacaaaacaaac
tttcttcatctgcttccacatgagaaacctgtcaatgcagcttacttcagcccaacacat
ggtgccaagcttctgagcacagatcagcacaatgaaatcagggtttactcatcttcagac
tggaccaaaccacagcatctgattccacatccacacagacaatttcagcacctcacacct
attaaggcaacgtggcatcctcgctatgacctcattgtcgtaggtcgctacccagacccc
aagttccccgggtacacgctgaacgagctgcgcactgtggatgtgtttgatggaaacacc
ggcgagatggtttgtcagctctacgatccaaatgcttctgggatcatctcgctcaataaa
tttaaccctatgggagacacactggcttctggcatgggctttaatattctgatctggaac
caggaggagatggcagccaagaagcatgaacatctcttgaaagccatgacaaacgagatt
gaaccatga

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