Pyrgilauda ruficollis (rufous-necked snowfinch): 121349420
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Entry
121349420 CDS
T07608
Symbol
DCAF5
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121349420 (DCAF5)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121349420 (DCAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_Vps41
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
121349420
NCBI-ProteinID:
XP_041315734
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MCPCPRKSLEWRTRPSVPGVANVTVPAGASVPVPPRRSSSELTVGGATLEPGREARAAAE
DQLLREAGRSQRDQEAAECLTPLCHGWLKKNHHNHNKGGSGGGEAAAGEGAAGSGAGGSM
RRRGSRGGSMRSVVGFLSQRGLEGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEF
SNNGGQWLVSGGDDRRVLLWHMEEAIHSRVKPVQLKGEHHSNIFCLAFNSGNTKVFSGGN
DEQVILHDVESTETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESSHGEPF
CLAHYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVRF
NSNGTQLLALRRRLPPVLYDIHCRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDD
FNLYMWRIPPDPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWS
PYKQPDCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFDS
LVRREIEGWSSDSDSDLSESTILQLHAGVSERSAYSESESSTSLHHSPPHGAEESEETAY
NLRALRSTASPSAREDVASRQQRLSALRKYQDKRLLALSNESDSDDNTCEAELDTDLFPR
PPSPSPEENESSSSSSSSSTEDEEELNERRTSMRQRNALRRRQKVQKEERTSTNTENVTP
YIGEDIYDYPQIKVDDLSSSPASSPERSSANKEVLKERTSPCSDSESVERKIYKAYKWLH
YSYISYSASKDGESSRGDGENDEGKPGTSGRHSATCSLTKEDARNLSSVVPQGSSALSAE
NHNRENLKECGGIENSSNGQAHDCDNQQRTEGQENTLEDMSSGGVEHSFETKKLNGKANC
KGLNSCTEEPCIQTTGLVEQKNSQNCQPAPSHHSVVPPFSAVAICSMSGHCSRNQTDGSE
ERSFDPSCVNHNNGHLHLHPPCFNNGQSFGEQESVMQGLQVHSNADNGNLVQVGVTLHRD
CCLSEIDSNSYNVSTREDTADLHPAGSESTQSLGGLKRHRAELEDADSESSSLEKKLKT
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccttgccccaggaagtctttggagtggcgaacgcgtccgtcggtccccggagtg
gcgaacgttaccgtccccgcaggggcgagtgtgcctgtccccccgcgccgctccagcagc
gagttaaccgtcggcggcgccacgctagagccgggccgggaggcgcgggctgcagctgag
gatcagctgctgagggaagcggggaggagccagcgggatcaggaagcggcggagtgtcta
acacctctctgccatggctggctaaagaaaaatcatcataaccataacaaggggggaagc
gggggaggggaggcggcggcgggggaaggagcggcggggagcggcgcaggcggcagcatg
aggaggagaggcagccgggggggcagcatgcggtcggtggtggggttcctgtcccagcgg
ggcttggagggggaccccctgctcacccaagacttccaacgaagacgcctgcggggctgc
aggaacctctacaagaaggacctcctgggccacttcggctgtgtcaatgccattgaattc
tccaacaatggaggccagtggctggtctcaggaggagatgaccgtcgagtcttactttgg
catatggaagaagccatccactcaagagtcaaaccagttcagctgaaaggggagcatcac
tctaacatcttctgcctagcttttaacagtggcaatacaaaagtgttctctggaggcaat
gatgagcaagttatacttcatgatgttgaaagcaccgagaccttggatgtgtttgcccat
gaagatgcagtgtatggcctttcagtgagcccagtaaatgacaacatctttgctagctca
tcagatgatggccgggttctgatctgggacatccgagagtcttcccatggcgagcccttc
tgcttggcacactacccatcagcctttcacagtgtgatgtttaatccagtagaacccaga
ttactggctactgccaactcaaaagaaggtgtgggactctgggatattcgtaaacctcag
agttccctgctccgctatggtgggaacctttcccttcagagtgccatgagcgtgcggttc
aacagcaatggcacccagctgctggccctgcggcggcgcctgccccccgtgctctacgac
atccactgccgcctgcccgtcttccagtttgacaaccagggctacttcaactcctgcacc
atgaagagctgctgttttgcaggtgatcgtgatcagtacatcctttcgggctctgatgac
ttcaatttgtatatgtggaggattcctccagatccagaagcaggtggcattggcagggtt
gtcaatggtgctttcatggtattgaaaggtcatcggtcaattgtaaaccaagtgcggttt
aatcctcacacctacatgatctgttcttctggcgttgaaaagattataaagatctggagt
ccttacaagcagcctgactgcacaggggacctggatggtagaattgaggatgattcacgt
tgcctctacactcatgaagagtacatcagtcttgtgctgaacagtggtagtggtttgtcc
catgattatgccaaccaatcagtccaggaagatccaaggatgatggccttttttgactct
ctggtgcgccgggagattgagggctggagttctgattcagacagcgacctcagtgagagc
acaatcctgcagctccatgcaggagtgagtgaacgctccgcttacagcgagtcagagtcc
tccacctctctgcatcactccccaccacacggggctgaagagtctgaagaaactgcctat
aacttaagggccttaagatcaactgcatccccttcagccagagaagacgtggcttcccgt
cagcagaggctctctgcactgagaaagtatcaggacaaacgtctcctggccctttccaat
gagtctgactctgatgacaatacctgtgaggcagagctagatacagaccttttcccacgg
ccaccatctccgagtcctgaggagaatgaatccagcagttccagcagcagcagcagtaca
gaagatgaagaggagctgaatgaaagacgcacatcgatgaggcaacgcaacgcactgagg
cgcagacagaaggtgcaaaaggaggaaaggactagcactaacacagagaacgtaacccct
tacataggtgaggacatatatgattacccccagatcaaagtagatgatctttcttcctct
ccagcttcttcaccagaaaggagttcggccaacaaagaagttcttaaagaaaggacgtcc
ccttgttcagacagtgaatcagtggagagaaagatttacaaagcttacaaatggctccat
tattcttacatatcatattcagctagtaaagatggtgaatcctccagaggagatggagaa
aatgatgaagggaaaccaggaaccagtggaaggcacagtgcaacatgctcgctaactaag
gaagatgctaggaacttaagttccgtagttcctcagggttcctcagctctttctgctgaa
aaccacaacagagaaaatttaaaagaatgtggtgggatagaaaattctagtaatggtcag
gctcatgactgtgacaatcagcagcggacagagggtcaagaaaacacattggaagacatg
agcagtggaggtgtagagcattcttttgagactaaaaagctcaatggtaaagctaactgc
aaagggctaaatagctgtacagaagaaccttgcattcagaccacaggacttgtggaacag
aaaaatagccagaactgtcaaccagcaccaagccatcactcagtggtccctccgttctca
gctgttgccatctgtagcatgtcaggtcactgctccagaaaccagactgatggcagtgag
gagaggagcttcgacccctcctgcgttaaccacaataatggccacttgcatcttcaccct
ccatgcttcaacaatggacagagttttggagagcaggagtctgtgatgcaaggactacag
gtgcactcaaatgctgataatggcaaccttgtacaggtgggtgtgaccttgcacagagac
tgctgcctgtctgaaattgactccaacagctacaatgtgagcacaagagaggatactgct
gacctgcatcccgcgggcagtgagagcactcaatctcttggaggactgaaaagacacaga
gccgagttggaagatgcagattcagagagttcatctttagaaaagaagttaaaaacatga
DBGET
integrated database retrieval system
