Pyrgilauda ruficollis (rufous-necked snowfinch): 121349424
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Entry
121349424 CDS
T07608
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121349424 (PRDM11)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121349424 (PRDM11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
Zn_ribbon_PRDM4
FOG1-like_PR
DUF7822
DUF4954
Motif
Other DBs
NCBI-GeneID:
121349424
NCBI-ProteinID:
XP_041315752
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MSFPVLIRWWSRPGGREPPLPPPPSPARPRDPSSPGTSQRGRRGGRAQPAGLPPPLPGGA
GPPTPRRAPRARSAENMSENLKDCLIQTQASLGEMVTIKTEACSPHRDQEYGQPCSGRPD
PQSMEMEPKKLKGKRDVIMTKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGI
PDRAALTIPPGMEVVKEPSGENDVRCMNEVIPKGHIFGPYEGQISSQDRSAGFFSWLIVD
KNNRYKSIDGTDETKANWMRYVIISREEREQNLMAFQHSERIYFRACRDIHPGEKLRVWY
SEDYMKRLHSMSQETMNRNCTSGDKMLKNENSEKNVENQEDARGALQFTTLKQGKSPYKR
SCDEGEFHPQTKKKKIDLIFKDVLEASLESAKFEENQLASSTPLSLRRASKYQAEDIFEQ
CGSAMQHGSLTLSRNQRESEWRVPHSSSFISAKDMSILEDEEEEPLSLKADSPTELSLAS
AQGNSHEIPTTSFCPNCIRLKKKIRELQAELDMLRSGKLPEAPVLPPQVPELQEFSDPTA
SESIISVPTIMEDDDQEVDSADESVSNDMIAATDEPSKMSSATGRRIRRFKQEWLKKFWF
LRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRM
HPEKTEEMCRNMTLLFNTAYHLALEGRPYYDFRPLAELLRKCELKVVDQYMNEGDCQILI
HHIARALREDLVERIRQSPFLSIILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQEL
GFSTTDSYLQALDRAFSSLGIRLQDEKPTIGLGVDGANITASLRANLFMTIRKTLPWLLC
LPFMVHRPHLEILDAISGKELPCLEELENNLKQLLSFYRYSPRLMCELRVTAATLCEETE
FLGDIRAVKWIIGEQNVLNALIKDYLEVVAHLKDVSGQTQRADASAIALALLQFLMDYQS
IKLIYFLLDVIAVLSRLAYVFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENF
RESFNGIAVKNLRVAEAKFQSIREKICQKTQVILAQRFDSRSRTFVKACQVFDLAAWPRS
TDELMSYGKEDMVQIFEHLETVPSFSREVCREGMDTRGSLLMEWRELKVDYYTKNGFKDL
LSHICKYKQRFPLLNKIVQILKVLPTSSACCEKGRTALQRVRKNNRSRLTLEQLSDLLTI
AVNGPPIANFDCKRALDSWFEEKSGNSYALSAEMLSRMSSLDQKPMLQSMDHGSEFYPDI
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcctgtgctaataagatggtggtcacggccgggagggagggagccgccgctg
ccgcctccgccgagcccggcccggccccgggacccgtcctcgcctgggactagccagcgg
ggccggcggggtgggagggcgcagccagccgggctccccccgcccctcccgggcggagcg
ggccccccgacgccgaggcgggctccccgcgcccgcagtgccgagaacatgagtgagaac
ttgaaggactgtttgatccagacccaggcttccttaggggagatggtgacgataaaaaca
gaggcctgctctccacaccgggaccaggagtatggacagccttgctctggaaggcctgac
ccgcagtccatggagatggaacccaagaaactgaaaggaaaacgggatgtaatcatgacc
aagagctttcagcaagtggatttctggttctgtgagtcctgccaggagtactttgtggat
gagtgtccaaaccatggccccccggtgtttgtgtctgacaccccagtgcccgttggcatt
ccggaccgggcagcgctgaccatcccgcctggaatggaggtggttaaagagcccagtggg
gagaacgacgtgcgctgtatgaacgaggtgatccccaaaggtcacatctttgggccctac
gaggggcagatctctagccaggacaggtctgcaggattcttctcatggctgatcgttgat
aagaacaaccgctacaaatccattgatgggacagatgaaaccaaagcaaactggatgaga
tatgtcatcatctcccgggaggagagggagcagaacttgatggcctttcagcacagtgag
aggatttacttccgtgcctgccgtgacatccaccctggggagaagctgcgggtctggtac
agtgaggactacatgaagcggttgcacagtatgtcccaggaaaccatgaacagaaattgc
acaagtggagacaaaatgttaaagaacgaaaactcagaaaagaatgtagaaaatcaagag
gatgcaaggggagcactccaattcactaccttaaagcaggggaagagcccctacaagcgc
agctgtgacgagggggaattccacccccaaacaaagaaaaaaaaaattgacctcatcttc
aaagatgtcctggaggcttctttggagtctgccaagtttgaagagaatcagttagcatca
agtacaccactttccctcagaagagcatctaaataccaggctgaagacatctttgagcag
tgtggcagtgccatgcagcatggctccctgaccctcagcagaaaccagagggagagcgaa
tggagggtccctcacagttcctctttcatctcagccaaggacatgagcatccttgaagat
gaggaagaagagcccctgtcacttaaagcagacagcccaactgagctgtcactggcctct
gcacaaggcaactcccatgagatccccaccacatccttctgccccaactgcatccggctg
aagaagaaaatccgggagctgcaggctgagttagacatgctgagatctgggaagttaccc
gaggcacccgtgttaccgccccaggtacccgagctccaagagttctcagaccccacagct
tcggaaagcatcatctcagttcccaccatcatggaggacgatgaccaagaggtggattct
gctgatgaatcagtttccaatgacatgattgctgctacagatgagccttctaagatgtct
tctgcgacgggccggaggatacggcggttcaagcaagagtggcttaaaaagttttggttt
ctgcggtactccccgacactgaatgagatgtggtgccatgtctgtaggcagtacacagtg
caatcttctcggacttcagccttcatcattggctctaagcagttcaagatacacacgata
aagcttcacagccagagtaacctccacaagaagtgcctgcagctttacaagctcaggatg
cacccagagaagacagaagagatgtgccgaaatatgaccctgctcttcaatacagcctac
cacctggccctggagggcaggccctactatgactttcggcctctggcagaactactgaga
aagtgtgaactcaaggtggtggatcagtacatgaatgaaggagactgccagatcttaatt
caccatatcgcccgggcactcagagaggacctggttgagcgcatccggcagtctcccttc
ctcagcatcattctggatgggcagagcgatgacttgcttgcagatacagttgcagtctat
gtgcagtacaccagcagtgatgggcctccagcaactgaattcctgtctcttcaggagcta
ggcttttctacaacagacagttaccttcaagcattagaccgggctttttccagcctggga
atacgactgcaggatgaaaagccaactatcggcttgggagttgatggtgctaacattacc
gccagcctgagagccaacttgttcatgacaatcagaaagaccttgccctggctcctctgc
cttccctttatggtgcataggccccacttggaaattttggatgcaattagtgggaaggag
ctaccatgtctggaggagctagaaaacaatttgaagcaactgctcagtttctatcgttat
tctccccgactcatgtgtgagttaagggtcactgctgccactctgtgtgaggagaccgag
ttcctgggggacattcgagcagtgaagtggatcattggggagcagaacgtgctcaacgct
ctcatcaaggattaccttgaggttgtagcccatctcaaagatgtcagtggccagacccaa
agggcagacgcttctgccattgccttggccctcctgcagttcctgatggactaccagtcg
attaaactcatctacttcctgctggatgtgattgctgtgctttcacgccttgcctacgtc
ttccaaggggagtaccttcttgtgtcacaggtggacgataaaatagaggaggccatccag
gagatcagccggctagcagactcccctggggagtacttgcaggagtttgaggagaacttc
cgtgaaagctttaatggcattgctgtgaaaaatctacgggtggctgaagccaaattccag
tcgatcagagaaaagatctgccagaagacccaggtgatcctagcccaaaggttcgattcc
cgcagccggacatttgtgaaggcctgtcaggtatttgaccttgcagcttggcccagaagc
actgatgagctcatgagctatgggaaggaggatatggtacaaatatttgaacacctggag
acagtcccatcattttccagagaggtttgccgagaggggatggacacccgagggagtctg
ctgatggagtggcgagaactcaaggtggattattataccaaaaatggttttaaagacttg
ctcagtcacatttgtaaatacaaacagagatttcccctcctaaataaaatagttcagatc
ctcaaagtccttcccacctcttcggcctgctgtgagaaggggcgcaccgcgctgcagaga
gtgcgcaagaacaaccgctctcggctcacgctggagcagctcagtgacctgttgacgatt
gctgttaacgggccgcccattgccaacttcgattgcaaaagggcactcgatagctggttc
gaggagaagtcaggcaatagttatgcgctctcggccgaaatgctgagcaggatgtcatct
cttgaccagaagccgatgttgcagagcatggaccatggctctgagttttaccctgatatt
tag
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integrated database retrieval system
