KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121349449
Entry
121349449         CDS       T07608                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510  Focal adhesion
pruf04517  IgSF CAM signaling
pruf04518  Integrin signaling
pruf04519  Cadherin signaling
pruf04520  Adherens junction
pruf04530  Tight junction
pruf04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121349449 (ACTN1)
   04518 Integrin signaling
    121349449 (ACTN1)
   04519 Cadherin signaling
    121349449 (ACTN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121349449 (ACTN1)
   04520 Adherens junction
    121349449 (ACTN1)
   04530 Tight junction
    121349449 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121349449 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pruf04131]
    121349449 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pruf04812]
    121349449 (ACTN1)
   04147 Exosome [BR:pruf04147]
    121349449 (ACTN1)
Membrane trafficking [BR:pruf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    121349449 (ACTN1)
Cytoskeleton proteins [BR:pruf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     121349449 (ACTN1)
Exosome [BR:pruf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121349449 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   121349449 (ACTN1)
  Exosomal proteins of bladder cancer cells
   121349449 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 XisI FAZ1_C Uds1 U3_assoc_6
Other DBs
NCBI-GeneID: 121349449
NCBI-ProteinID: XP_041315823
LinkDB
Position
Unknown
AA seq 892 aa
MDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEI
NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq 2679 nt   +upstreamnt  +downstreamnt
atggatcactacgacccgcagcagaccaatgactacatgcagccggaggaggactgggac
cgggacctgctcctcgacccagcctgggagaagcagcagaggaagacatttacagcatgg
tgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttcagg
gatggtcttaaactcatgttacttctggaagtcatttcaggagaacgtctggcgaagcct
gaaagaggcaaaatgcgagtgcacaaaatatccaatgtgaacaaggccttggatttcatt
gccagcaaaggagtcaagctagtatccattggagcagaagaaattgtggatggcaatgtt
aaaatgacccttggaatgatctggaccatcatccttcgttttgccattcaggatatctca
gttgaagaaacatctgctaaagagggacttttattatggtgtcagaggaagacagccccc
tacaaaaatgtaaacatccagaacttccatatcagttggaaggatggccttggtttctgt
gctttaattcatagacaccgtccagagctcatcgactacgggaagctacgaaaggatgat
cctctcactaatctaaacacagcttttgatgtggctgagaaatacctggatattccgaag
atgctggatgcagaagacattgttggaactgcccgtcctgacgagaaggccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat
cggatctgcaaggtgctggcagtcaaccaagaaaacgaacagctcatggaagactacgaa
aaactggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaaccga
gccccagagaacaccatgcaagccatgcagcagaaactggaggacttccgggactaccgc
cgcctgcacaagccccccaaggtccaagagaagtgccaacttgagatcaatttcaacacc
ttgcagaccaagctgcggctcagcaataggccagccttcatgccctccgaagggaaaatg
gtctcggatataaacaatgcctggggtggcctagagcaggctgagaagggctacgaggag
tggttattgaatgagatccggaggctagagaggctggatcacctggcagagaagttccgg
cagaaggcatccattcatgagtcctggacagatggtaaggaagcaatgctgcagcagaag
gattacgaaactgcaaccctgtcggagatcaaggccctgctgaagaaacacgaggccttt
gagagtgacctggctgcacaccaggaccgcgtggagcagattgctgctattgcacaagag
ctcaatgagctggactattacgactctcccagtgtcaatgccaggtgccagaagatctgt
gatcagtgggataatctgggtgccctaacccagaagcgtagagaagccttggagaggaca
gagaaactattggaaacaattgaccagttgtacctggagtatgccaaacgagctgcccct
ttcaataactggatggaaggggccatggaggatctgcaggacacattcatcgttcacacc
attgaggagatccagggattgaccacagctcatgagcagttcaaagccacgttgccagat
gcggacaaggagcgacaagccatcctgggaattcacaatgaagtctcaaagattgtccag
acatatcatgtcaacatggcgggaacaaatccttacactacaatcaccccacatgagatc
aatggcaaatgggaacatgtgcggcagctggttcccagaagggatcaagccctgatggaa
gaacatgctcgccagcagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaat
gtcattggaccctggatccagaccaagatggaggagattggccgcatttccatagagatg
cacgggaccctggaggaccagctcaaccacttgcggcagtatgagaaaagcatcgtgaat
tacaaaccaaagattgaccagctggaaggagaccaccagctgatccaggaagcgctgatc
tttgacaacaagcacaccaactacaccatggagcatatccgcgtgggctgggagcagtta
ctaacaacaattgctagaaccatcaacgaagtggaaaaccagatcctgactcgtgatgcc
aaaggaatcagccaggaacagatgaatgagttccgggcttctttcaaccactttgacagg
gaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggttac
gatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcatcgtggac
ccgaaccgtttgggtgtagtgaccttccaggccttcatcgacttcatgtcccgggagaca
gcagatacagatactgctgaccaggttatggcttccttcaagatcctggctggagataag
aactacatcactgtggatgagctgcggcgggagcttcctcctgaccaggctgaatattgc
attgctaggatggcaccctacaatggccgtgatgctgtacccggtgccctggactacatg
tccttctccacagcgctctacggcgaaagtgacctttaa

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