Pyrgilauda ruficollis (rufous-necked snowfinch): 121349605
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Entry
121349605 CDS
T07608
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121349605 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121349605 (BARD1)
04121 Ubiquitin system [BR:
pruf04121
]
121349605 (BARD1)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121349605 (BARD1)
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121349605 (BARD1)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121349605 (BARD1)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121349605 (BARD1)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121349605 (BARD1)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
121349605 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
NIBRIN_BRCT_II
ANK_LRRK2
zf-rbx1
RTT107_BRCT_5
zf-RING_UBOX
Siva
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121349605
NCBI-ProteinID:
XP_041316144
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MREALRGRSGNQPAPGRPLRPAAPSMAPPGHPWSHTRAALGRLERALLCSRCAGVLREPV
SLGQCEHVFCLPCVGDCVGTECPVCHVPAWVQDAQINRQLDNMIQLCSKLRQLLGADASD
SAEDISTPTDSELEKKSKKEQIKMWFSPRSRKIRCVVNRSQARTKSNDLGQDTSSVYDFF
PSPPHEKPSKPTKRPTQRQIKKMKKKHLADINKEWSLEKPEQKKAEKTPKEKCVTICSQP
VVLCTQEPESPEERPQQESVKEADSSNNTEDVEVLPQVESPEKKGNSEVVCAARDSKEEN
GAAGRLLTIANEVTPLKRGREQCRLQGTPQSKRARRSEGGIPGKSGRQADGLEESLQGSP
ISPATEQTPAHISSSASKLPDTGMKTRRSAALQAINSSSLSQSPSTPSTSKTCSQLATPL
SPSVLKSPGVNSIARRNYKGETLLHVASIKGDLAAVEQLLKNGADPNVKDNAGWTPLHEA
CNHGHREVVELLLQHRALVNTTGYQNDSPLHDAARNGHAAIAELLLLHGASRDAVNIFGL
RPVDYAESKKMKSVLMLPVKNESFSLNQPSEALSSSQPRNGPLGILGSNLSVKQQKLLNK
LAALLKAQRCTEFNSRVTHLVIPDVPMPTTVKCMMAVLSGCWVLKFEWVQACLQSSAREQ
EEKYEVQGGPRRGRLNREQLLPKLFDGCYFYFLGPFKKHQKSDLLELVKAAGGQVLVRQP
KPDSDVTQTINTVSYHAEPTSDQRLCTQYVIYDVASKIQPEKIRQGKVWMAPSSWLIDCV
MSFQLLPVK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccaggcaggcccctccgc
cccgctgccccctccatggcgccgcccggacacccctggtcccacacccgcgccgcgctg
gggcggctggagagggccctgctctgctcccgctgcgccggtgtcctgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctgccctgcgtgggcgactgtgttggcacc
gagtgccccgtgtgccacgtgccagcctgggtacaggacgcacagatcaaccggcagctg
gataacatgatccagctctgcagcaagctgcggcagctcctgggcgccgacgcctcagat
tcagcagaagatatatccacaccgactgactcggagttggaaaaaaagagcaagaaggag
cagataaaaatgtggttcagcccaagaagcaggaagattcgatgtgtcgtgaacaggagt
caggctcgcactaaaagcaacgaccttggtcaagacacatcttccgtttatgatttcttt
ccttcccctcctcatgaaaagccctctaagccaacaaaaagaccaactcagagacagatt
aagaagatgaagaagaaacatctagcagacattaacaaagagtggagcttagagaaacct
gagcagaaaaaagctgagaagactcccaaggaaaagtgtgtgaccatctgcagtcaacca
gtagtgctgtgcactcaggaaccagagagtcctgaagaaagacctcagcaggagtctgta
aaggaagctgactccagcaataacacagaagatgtggaagttctaccacaggtagaatcc
ccggaaaagaaaggcaacagtgaggttgtgtgcgctgcacgagatagcaaagaagaaaat
ggtgctgcagggagattgctgacaatagcaaatgaagttacgcctttgaaacgtggaagg
gagcaatgcagacttcagggtactcctcagtctaaaagagcaaggagaagtgaggggggc
attcctgggaagtcaggcaggcaggctgatggcttagaggagtcactgcagggctccccc
atctccccagccactgaacagacaccagctcatatttcttcctccgcatccaaactccct
gacactggaatgaagacaagaagatctgcagcccttcaagcaatcaacagttcttcactt
tcacaatctccctctaccccatccacttccaagacttgcagtcaactagcaacaccactc
agtccttctgtgttgaaatcccctggtgtcaactcaattgccagaagaaattacaaggga
gagactttgctccatgttgcttccatcaagggtgacttagcagctgtggagcagctgctg
aaaaatggggcagatcccaatgtcaaagataatgctggctggacaccactgcacgaggcg
tgtaaccacgggcacagggaggtggtggagctgctgctgcagcaccgggcgctggtgaac
accacgggctaccagaacgactcgccgctgcacgacgccgccaggaacgggcacgcggcc
atcgccgagctgctgctgctgcacggcgcctcccgcgacgctgttaatatatttggtctg
cggcctgtggactatgcagaaagcaaaaagatgaaatctgtgctaatgttaccagtgaag
aatgaatcattttcacttaaccagccctctgaggcactgagctccagccagccaagaaat
ggaccccttggtatactggggagcaaccttagtgtgaagcagcagaaattgctgaacaaa
ttagcagcactcctgaaggcccagaggtgcactgaatttaacagcagagtaactcatctt
gttatccctgatgttccaatgccaactactgtcaaatgcatgatggctgttctgagtgga
tgttgggtcctcaagtttgaatgggtacaagcctgtctgcagagctcagctcgagagcaa
gaagagaagtacgaagtccaaggtggcccccggcgagggcggctcaaccgggagcagctg
ctgcctaagttgtttgatggatgctacttctattttttgggacctttcaaaaagcaccag
aagagtgacctgctggagctggtgaaagcagcgggcggccaggtgctggtcaggcagccc
aaaccagacagtgacgtgacacagaccatcaacacagtgtcctaccatgcagagcccacc
tctgaccagaggctctgcactcagtatgtcatctatgacgtggcttccaagatccagccg
gagaaaatccggcagggcaaggtgtggatggccccctccagctggctcatagactgtgtg
atgtcatttcagctcctgcctgtgaagtga
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integrated database retrieval system
