Pyrgilauda ruficollis (rufous-necked snowfinch): 121349732
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Entry
121349732 CDS
T07608
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121349732 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121349732 (FIP1L1)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121349732 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
121349732
NCBI-ProteinID:
XP_041316419
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSVPPPPGSEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITVQQGRTGNLEKELAVQSTKPDFTSPPALFKSGIPTNRRISGTIDV
IGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFTKPPPFFPPGAPPTHLPPPPFLPP
PPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIDSGHSSGYDGRPVRAFSYGS
VTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERERERSRDRDRDRDRDRDRDRDRTRD
RERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSS
RSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggttgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaatct
agtgttccacccccacctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgacgaagatgatgtt
caagtcaccataggggatattaagacaggagctccacagtttagttatggagcagcaccg
gtgaacctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggggctgatctctcagattattttaac
tatggcttcaatgaagatacctggaaagcttactgtgaaaaacagaagagaatacgaatg
ggtcttgaaattttgccagttacctcaaccacaaataaaattacggtacagcaaggcaga
actggaaatttggagaaagagttggcagtgcagtcgactaaacctgatttcacatctcct
cctgccttattcaaatcaggaattccaacaaacaggcggatatctggcacaatagatgtg
attggacagaccatcactatcagcagggtggaaggacgacggcgtgctaatgaaaacagc
aacatacaggttctttcagaacgctctaatcctgaagtagacagttttaccaagccacct
ccatttttccctccaggagctccacctactcaccttccaccacctcctttcctcccaccc
cctccaactgtcagtactgctccacctctgattcccccaccaggtataccaataacagtg
ccaccaccaggttttccaccaccacctggcggtcctccaccttccctcatacccacgata
gacagtggacattcttctggctatgatggtcgtccggttcgtgcattttcctatggcagt
gtcacctttccacaccctgcgggttctgcaccctcatggtctagtcttctggacaccagc
aaacagtgggattactatgcacgaagagagaaggatagggaacgtgagagagagagatcc
cgagatcgggatcgtgaccgggaccgggaccgagacagagatcgagaccgtaccagagac
agggaaagggaccgagatcacagtccgtcttcaagtgcattcaacagtgatgaagaacgc
tacagatacagagactatgcagagaggggctacgaccgccataggacaagcagagagaaa
gaagacagacacagagacaggagacacagagagaaagaagagactcgacacaagtcatct
cgaagtaacagcagacgtcgtcacgacagtgaagaaggggatagccacagaaggcacaaa
cacaagaagtccaaaagaagcaaagaaggaaaagaagccagtggtgaacctgctcctgaa
caggaaaacactgaagctgcccctgtggaatag
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