KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121349894
Entry
121349894         CDS       T07608                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pruf03036]
    121349894 (KDM4B)
Enzymes [BR:pruf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     121349894 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121349894 (KDM4B)
Chromosome and associated proteins [BR:pruf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121349894 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_3 DUF4537
Other DBs
NCBI-GeneID: 121349894
NCBI-ProteinID: XP_041316646
LinkDB
Position
Unknown
AA seq 1095 aa
MGSEHPSPQNPGCKIMTFRPSLDEFRDFGRFIAFMESQGAHRAGLAKVIPPKEWKPRRTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMSVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYELWKQGKDIAVLDHMKPTALSSPELDAWNE
TKAELKAKLLRRIGDEEEDSKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEERGKGPEGEAGECKAKARPAKAKGERKKKQPFPPQPPGPPPGPVPAPQPC
PEAGPGPARPPGPPSAPGAEQGRPAAALNVVQPSEAPAEEDDFKPRPIIPMLYVVPRSKK
VVFDKEHMSCQQAFEQFATQKGLGWREQGPPQGPGKEQDGAEAERAPLAAEAASAFSKMK
MEIKKSRRHPLGKPPTRSPLSVVKQETSSDEEMFPFSGEEEMSDPEALKSLLSFQWKNKA
LNFPAERKFNAAAALSEPYCAVCTLFYPYNQSSQVEKEAAPLSAGEPPSFLHLSKCGQRS
KPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNESWS
CSRCSAGAWAAECCLCNLRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIP
EQRWKLRCVYCRKRMKKVSGACVQCSYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCF
KHKAANQNVPLRREVALGQTVITKNRNGLYYRCRVIGTSTQTFYEVNFDDGSYSDNVYPE
SIISRDCIQMGPPPEGELVQLQWTDGIIYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIY
TLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNPRNPEEYGQSPDYLAFMES
LLQTQYQPGTQSNMF
NT seq 3288 nt   +upstreamnt  +downstreamnt
atggggtcggaacacccgagcccgcagaaccctggctgcaagatcatgaccttccggccc
tcgctggacgagttccgcgacttcggcaggttcatcgccttcatggagtcccagggggcc
caccgggctgggctggccaaggtgatcccccccaaggagtggaagccgcggcgcacgtac
gacgacatcgatgacatggtgatcccggcgcccatccagcaggtggtcacgggccagtcg
gggctcttcacccagtacaacatccagaagaagcccatgagcgtgggcgagtaccggcgc
ctggccaacagcgagaagtactgcacccctcggcaccaggactttgaggacctggagcgc
aagtactggaagaacctcaccttcgtgtctcccatttatggggctgacatcagcggctcc
ctctacgatgcagacgtggatgagtggaacattggcaacctgaacacccttctggacatg
gtggagcacgagtgtggcatcatcatcgagggtgtgaacactccctacctctactttggg
atgtggaagacaacttttgcttggcacacagaggacatggatctctacagcatcaactac
ttgcattttggggagcccaaatcctggtacgccattcccccggagcacggcaagaggctg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgcgatgctttcctccgt
cacaagatgaccctcatttctccctccatcctgaagaagtatgggattccctttgacagg
atcacccaggaggccggggagttcatgatcacatttccctacgggtaccacgctggcttc
aatcacggcttcaactgcgccgagtccaccaacttcgccaccctgcgctggatcgactac
ggcaagatggcaacgcagtgcacgtgccgcaaggacatggtgaagatctccatggacgtg
tttgtcagggtgctgcagcccgagcgctacgagctctggaagcagggcaaggacatcgcc
gtgctggaccacatgaagcccacggccctgagcagccccgagctcgacgcctggaacgag
accaaggcagagctgaaggcgaagctgctccgcaggataggagatgaggaagaggacagc
aaacaccggtctcaccgaaaaaggagtcagcccagaagacacaaaacagaggatcagaag
tctcttggggatgtcatggctattgaaactgccttggaagatgtgaaagtaaaagaggag
ctgaaaagggggccggatctggaggaagaggagagaggcaaagggccggagggagaagca
ggcgagtgcaaggccaaggcgcggcccgccaaggccaagggcgagcggaagaagaagcag
ccgttcccccctcagccgccggggccgcccccggggcccgtcccggccccccagccctgt
cccgaggccggcccgggcccggcacggccgccggggcccccctcggccccgggcgcggag
cagggccggcccgcggccgcgctgaacgtggtgcagccctcggaggcgccggccgaggag
gacgacttcaagccgcggcccatcatccccatgctgtacgtggtgccccgcagcaagaag
gtggtgttcgacaaggagcacatgtcctgccagcaggccttcgagcagttcgccacgcag
aaggggctgggctggcgcgagcagggcccgccgcagggccccggcaaggagcaggacggc
gccgaggccgagcgcgccccgctcgccgccgaggctgcttctgccttctccaagatgaag
atggagatcaagaagagccgccggcacccgctgggcaagcccccgacgcgctccccgctg
tccgtggtcaaacaggagacctcgagtgacgaggaaatgtttccattttctggagaggaa
gagatgagtgatccagaggctttgaaatctttactttccttccagtggaagaacaaagca
cttaatttcccagctgaaaggaagttcaatgcagctgctgccctgagtgagccatactgt
gctgtctgcaccctcttctacccctataaccagtcctcacaggtggagaaggaagccgcc
ccgctctccgcaggggagccgccctccttcctgcacctttccaagtgtggccagaggagc
aagcccctgatcccagagatgtgctttacctcaagtggagaaaacaccgagccccttcct
tcaaattcctacatcggagaggatggaaccagtcccctgatatcctgtgccaaatgctgc
ctgcaggttcatgctagctgttacgggatacgcccggagctggtgaacgagagctggtcg
tgctcgcggtgctcggccggcgcctgggcagcggaatgttgcctgtgcaatctcagggga
ggagctctccagatgaccactgatggccggtgggtccatgtaatctgtgctatcgctgtc
cccgaggcgcgcttcctcaatgtcatagagcgtcaccctgtggatatcagcgccatcccc
gagcagaggtggaaactgaggtgtgtgtactgcaggaagaggatgaagaaggtgtctggg
gcctgtgtgcagtgctcctacgagcactgctccacgtccttccacgtgacgtgcgcgcac
gcggccggcgtgcccatggagcccgacgactggccctacgtcgtgtccatcacctgcttc
aagcacaaagcagcaaaccagaacgtgccgttgcgcagggaggtggccctggggcagaca
gtgatcaccaagaacaggaacgggctctactaccgctgcagggtcatcggcaccagcacc
cagaccttctacgaagtcaacttcgacgacggctcctacagcgacaacgtctaccccgag
agcatcattagcagggactgcatccagatggggccccctcccgagggggagctggtgcag
ctgcagtggacggatgggatcatctacaaggccaagttcattgcagcccagatcagccag
atttaccaggtggagtttgaggatggctctcagctgatggtgaagagaggggatatttat
accttggaggaagagcttcccaagagagtcaagtctcgcctgtccctcagcactggggcc
cctcaggaagatgtattttcaggagatgaagtgagagcagccaagcgtccccggctgggg
aatccaaggaatcctgaggaatatggacaaagcccagattacttggcctttatggagagc
ctgttgcagacacagtaccagcctgggactcagagcaacatgttttaa

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