Pyrgilauda ruficollis (rufous-necked snowfinch): 121349915
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Entry
121349915 CDS
T07608
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121349915 (HDGFL2)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121349915 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
121349915
NCBI-ProteinID:
XP_041316687
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPAPASSSDSDVPENDPMAGSDAGDDE
DDAAMATVPTEKVDSDEDSDRGSDHSGLKRKSLAMKMPVTKRPRKSSSDLDQGSPSVTEE
ENSETSSESEKNSDQDFTPEKKPVARAPRRMPAAGRKKKKVESGSDSDSKADSDLETGNA
TVDMTKSDSDSDSDVSVKKAPRGRKPAEKPPPKPRGRKPKPERVPSSSSSDSDSDSDVDR
ISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKGEEVHTDSDSSAE
DETAKKGRRGRAKAPSSSDSELEQEKEVKKPVKKQPSELSRKPNQKEKRGRAEEKPRNKP
LKVERGRKKSDPIPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLNALEELGT
LQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKMESIQKANKAG
PEKDKGETEKGQEKLSGAETRNEKGEEETNADLSGPVNGESLSQKSEGTEEKDKSQGPGA
GELEASTEEPHNNSVQDYPKARGESEAADEEEEES
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccacacagcttcaaacccggggacctcgtcttcgccaagatgaagggctacccgcac
tggccggcccggatcgatgacatcgcggacggcgccgtgaaaccccccccgaacaagtac
cccatcttcttcttcggcacccacgagaccgccttcttgggccctaaagatctgttccct
tacgaaaaatataaagacaaatacggcaaaccaaacaagagaaaaggcttcaacgagggc
ttgtgggaaatccagaacaacccccacgccagttacagtgcccctgcgcccgcgagctcc
tccgacagcgatgtccccgagaacgaccccatggcggggagcgacgccggggacgacgag
gacgacgctgccatggccacggtccccacggagaaggtggacagcgacgaggactcggat
cgaggcagcgaccacagcgggctcaagaggaaatccttggccatgaaaatgcctgtgaca
aaacggcctcggaaatcctccagtgacttggatcagggcagcccctctgtcacagaagag
gagaactcagaaacatcttctgagtcagaaaaaaacagtgaccaggatttcactcctgaa
aagaagccagtggcccgggctccacggaggatgccagcagcagggaggaagaagaagaaa
gtggagtctggctctgactccgactccaaggcggactcggatctggagacgggcaatgcc
accgtggacatgaccaagtcagactcggactcggactcggacgtgtcagtgaaaaaggca
ccacggggccgcaagccagctgagaaaccccctcccaagccccggggcaggaaaccgaag
ccagagcgtgtccccagcagctccagcagtgacagtgacagcgacagcgacgtggatcgc
atcagtgagtggaagaggcgggacgaggagcggcggcgggagctggaggagaagaggaag
agggagcaggaggaggagatccgtcggctccgggagcaggagaaggaggagaaggagaag
aggaaggagaaggcagagaagggcgaggaggtgcacacagactcggacagcagtgccgag
gatgaaacggccaaaaagggccggagaggccgggccaaggctccatcctcctcggactct
gagctggagcaggagaaggaggtaaagaagccggtgaagaagcagccctcggagttgtca
aggaaaccaaatcagaaggagaagaggggccgagcagaggagaagccacggaacaaacct
ctgaaagtggaacgaggccggaagaaatccgacccgatccccgaaaggaggatggagaag
aaaaaggagcccacagtggaagagaaactgcagaaacttcacagtgagatcaagtttgcg
ctgaaggtggataacccggacatcaagcggtgtctgaacgcgctcgaggagctgggcacg
ctccaggtcacctcccacatcctccagaagcacacggatgtggtggccacgctcaagaag
atccggcgctacaaagccaacaaggacgtgatggaaaaagcggccgaagtctacacccgg
ttgaagtcgcgtgtgctgggaccaaagatggaatccatccagaaagccaacaaagctggg
cctgagaaggacaagggggagacagagaaaggccaggagaagctgtcgggagcagagaca
cggaatgagaagggggaagaggagacaaatgctgacctgtcaggtcctgtgaatggtgaa
tccctgtcccagaagtcagagggcacagaggagaaggacaagagccaagggccaggagct
ggggagctggaggcatccacagaggagccccacaacaacagtgtccaggactatcccaag
gctcgcggggagtcggaggctgcggatgaggaggaggaggagagctga
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