Pyrgilauda ruficollis (rufous-necked snowfinch): 121349940
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Entry
121349940 CDS
T07608
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
pruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121349940 (SRRM1)
03015 mRNA surveillance pathway
121349940 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121349940 (SRRM1)
03041 Spliceosome [BR:
pruf03041
]
121349940 (SRRM1)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121349940 (SRRM1)
Spliceosome [BR:
pruf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
121349940 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
121349940
NCBI-ProteinID:
XP_041316741
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DVPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPSRSKSRSRSRSRSPSHSRPR
RRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS
SRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPSXXXXXQPKPRRSPTPQQSNRA
RKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQY
RRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRHRHSHSRSPSPRKRQKDSSPRRRRR
SPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPP
PKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPSAKRRSPSVSSKHRKGSPPSRS
NRETRSPPPQNKRHSPSPRPRASHPSSSPPPPRRGASASPQRRQSPSPSTRPIRRVSRTP
EPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSRSPSANWSPAKKAKSPTQS
PSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAVAAAVAPADTTSAQG
DQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgggttcttccgcggaaccagtgcagagcaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaagtttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttattttcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacaacgacagatagagcaggagaaa
ctggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaagacaaagac
aacagagagaaaagagacagatccaggagtccaagaagacgcaagtcccgctctccctcc
ccgcggcggcgatcgtcgcccgtgcgccgcgagcggaagcgcagccactcccgctccccc
caccaccgcaccaagagccgcagtgccacccctgcccccgagaagaaagaggccactcct
gagccagagccctccgtgaaaccaaaggagactgttgtgcaagaggcaacttcaaacagt
gatgtcccaaaagctcctaaacctgaaccacctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggagaaggagaagactcgtcagagatcccca
agtcgatccaagtccaggtcaagatcccgatcccgttctccgtctcattctcgacccaga
aggcgccatagatcacggtcaagaaggcgacccagcccgcggcgccggccgtccccgcgc
aggaggagcccaccccgcaggatgcctcccccacccaggcacaggaggagcagatccccc
gtgaggcggagaagacgctcctcggcctcgctgtccggcagcagctcctcctcatcctca
tcgcgctcccgctctccaccaaagaagcctcccaagagacccgtgtccagccccccccgg
aaaacacgccggctgtccccctcggccagccccccccggcgccgccaccggccctcnnnn
nnnnnnnnnntgcaacccaagccccgccgctcgcccaccccccagcagtccaaccgcgcc
cgcaagagccgcggctccgtctcacccagcagggcttcagcacccaaacataagagtact
gagaaaagagagtctccttcgccagcacccaagcccaggaaagcagaattgtcggaatca
gaagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagaggcgccagtac
aggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaagaggag
aggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgccaccggcactcgcac
tcgcgcagcccctcgccccgcaagcgccagaaggattcctcccctcgcaggaggaggagg
agcccctcgccgccccccgcgcgccggcgccgctccccttccccggcgcccccgccccgg
cgccgccgctccccgtccccgcctcgccgaaggtctccatcaccacccccgcgcagacgt
tctccttctccacggagatactcccccccgatccagaggcgatattccccatctccccct
cccaagagaagaacagcttctcctcctcctcctcccaaaagaagggcctccccttccccc
cagtccaagcgcagagtctcccactccccaccaccaaaacagaggagctcccctagtgct
aaacggcgctccccttccgtatcttccaagcacaggaaggggtctcctcccagcagatcc
aacagggaaacacgttctccaccaccacaaaacaaaaggcattcaccttcaccacggcct
cgagcttcccacccctcctccagccctcctccgccgcgccggggagcgtcggcgtcgccg
cagaggagacagtcaccctcacccagcaccaggcccatcaggagggtgtccagaacgcca
gaacccaagaaaacaaaggcttccacccccagcccccggcgcgtgtcctcgtcccgatct
gcgtcagggtcacctgagacagctcccaaaaaacaccaaggacctgcatctcctgcccgc
tctcgctctccttctgcaaactggtcacctgcaaaaaaggccaagagcccaactcagagc
ccatcacctgccaggaattcagatcaagaaggtggtggcaagaagaagaagaaaaagaag
gataagaagcataaaaaggataaaaagcacaagaaacacaaaaagcataagaaggagaag
gcagcagcagctgcagtagctgctgctgtggctccagcagacaccacctcagcacaggga
gaccaggaagcagagacagaacccaaaaaggagacagaaagtgaacccgaggacaacctg
gatgacctcgaaaagcacctgcgggagaaggccctgaggtccatgaggaaggcgcaggtg
tcccccccctcctag
DBGET
integrated database retrieval system
