Pyrgilauda ruficollis (rufous-necked snowfinch): 121350109
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Entry
121350109 CDS
T07608
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pruf03037
]
121350109 (CFAP43)
Cilium and associated proteins [BR:
pruf03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
121350109 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
CFAP43_N
WD40_MABP1-WDR62_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40
EIF3I
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
121350109
NCBI-ProteinID:
XP_041317079
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MAGHGTGRSEGPHWVQGFSNKNLAFVNNQTLCYPCGNYILFLDIKTKKTRAVQCQTGQVG
AFAANANSQVVAFSDRQLNPLIHIYTFPELRKLAELKGDAQLDYTLLAFSFKGPYLASYS
SIPEFVLSVWNWQENILLCSESQPGLTGTSLSFNPMNWQQLCFVAESSVTIWCIERSKDE
HLLTRHPVELPDEQGVISPPEDLFFPFFRNDDPYYGPDLPISAIAGLEGDEAETFVPRNC
IKTSVHPIAHCWTAASEIYMGCKEGYVLAIDAEEYSVSVLQQKAPPEVMQKIADVVSYIR
SQVQKKKGHKPSNVQNPVLLAMAFCNEGLYAAGHEGFLTFYHIKDLEYEIKICADISQPI
SSLIFSPDYTSLLLVTDQGTVYSYRPAHSGEAVKLLDTSSSCFLAADFLTPGNNYCVSVT
TAGEVQVWSLEDGTFLSKLNLGTEATSLACCPSSNSVAVGTQRGQICFLDVTKAEAPRVV
HRTFLSKLPVLSLHYDQSGQFLIARATEGHIFILDARPSKLFQVLGYIVLADEVLHLSVI
SDFKNDLVEVMVLLNVAEVQQARLEIFRLSSAMITDNDKYVNEQGMFNASDLKKKQYDLD
FPLSSAVRLKDNTVYGYCSCAPFICKYHLSEENKFQDTSVFSSEKKIPSKQFGSGLLCLS
PNSQWLAASAKDGVLFIYNSSTLDILAQKHCHSYQGGGIRSMVFSLDGNFILVNGENDCA
LVCLKWKEIKKVPGVEEAALYWKSLRDILNKSTSDENSVLKSMAEWKLDPESTSKSLSVT
EEDGDITNTDGTTWIGQKTQKVMREETRMFANQKEELQMGIRKLRETIQKMMHENEQVPD
IEKLELWEFNLDLEEQEQAQAEAEEDVARARREIEMEILSYCYLQDLIKYECWDDMCVKE
RAVKCFHRDCEVRNYPLKERSKEEMETLKKVLQLKQTETADLQAQKENLDSETALSEEGE
KAAGAVTDDGASFCLNGSLSSQYGGDTSILYHQCDLHTKEQKLNQTILLKDVIYKVKTAF
NEEFDMVVQRKEQEIARVKERNLKIQEILEQLDLQVEVWEPVLTDEEMPERVLTVQDSEI
KAEKYMTQEEKEQAEMQAKLEMERRLAATDDERLRALDDMMGGVLEIRREDILKMDIPPP
DFVSRPEDLWTEEEKKVFEEYEKKVKELNEEKEDYRQFLRNEWNKIEASIKETTQNFDEI
VCKLSEKKLKSQMVIYQEELKIVNLIYSLLLDEELDTRESGLHKFLMKKKKEKVKGARKI
LSAKHGVEACTGPYKEALHEEKSLEHGFMKRFAHIPGNLFEELLQLYKHRPETPNTETLL
DTANPYVKGSPEDYQDAVSLLMKAMDEVDSPEHKPSGLDQSMWEHFCLARRNKIKNEELV
KWKALALSEMQTCLRRRTDENDKMKSELENTFQELTWLKEEKMKLQQNLTVQFLLKQGQV
ELESTQIPEYSDAVLIDRSVVEELNCSLAAQGEKKITAMVEFKDFSKEIIQLEWEHKKMK
MQIQDLKEKARDIVILPISKDCQLFLTVHNYETHIAQHLSGMEQSLGIMDKLHKKNVRNH
QKKVRELKKCICLKEQENYELSLQLKEMLVSVSERMHIFEAADTRDISEEITRQRYQEIV
KQKYLRNLIREQEKQLAILQSEIESWNPRTLHII
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacacggaacggggcgatccgagggaccacattgggttcaggggttctcaaac
aagaacttggcctttgtcaacaatcaaactctctgctacccttgtggtaattacatcctc
ttcctggacatcaaaacaaagaagacaagagcagtgcagtgtcagactggccaggtggga
gcctttgcagcaaatgccaacagccaagtggtggccttttccgaccggcagctgaatccc
ctcatacacatctacacttttccagaactgagaaaactggcagaattaaaaggtgatgct
cagctggactataccttacttgcatttagttttaaaggcccatatctggccagttactct
tcaatcccagagtttgttctttcagtatggaactggcaagaaaatatcctcctgtgcagt
gagtctcagccagggctaacgggaacctctctgagttttaaccccatgaattggcagcag
ctgtgttttgttgctgagagctctgttaccatctggtgcattgaaaggagcaaggacgag
catcttcttacacgacaccctgtggaactccctgatgaacaaggggtcataagtcctccc
gaggatttgtttttcccattttttcgtaatgatgatccatactatggccctgatttgcca
atttcagccattgctggactggaaggagatgaagcagaaacatttgtgcctagaaattgt
attaagacttcagtgcatcccattgcccactgctggactgcagcctcagaaatatacatg
ggatgtaaagaaggatatgttttggcaatcgatgctgaggaatacagtgtttctgttctt
caacaaaaagctccacctgaggtcatgcagaaaatagcagatgtggtgtcctatattcgt
agtcaagtgcagaaaaagaaaggtcacaaaccaagcaatgtgcaaaacccagttttactt
gccatggcattttgtaatgagggactgtatgcagctggacatgagggctttttaaccttt
tatcacatcaaagatctggagtatgagataaaaatctgtgctgatatctcacagcccata
tccagcctcatattttctcctgattacaccagtctgctgcttgtcactgaccaggggaca
gtctatagttatagacctgcccatagtggagaagctgtcaaactcttggacacatccagc
agttgttttctggcagctgattttcttactccagggaacaactactgtgtgtctgtaaca
actgcaggtgaagtacaagtttggtccttggaagatggaactttcctcagcaagctaaac
cttggtactgaggcaacttctttggcttgctgtccctcctccaacagtgttgctgtaggg
acccaaagaggtcaaatctgtttccttgatgttaccaaagctgaagctccacgagttgtt
cacaggacttttctttccaaacttccagtgctgtctttgcattatgatcagagtggccag
ttcctcattgcaagagctacagaaggacacatctttattctagatgctcgtccatcaaaa
ttattccaggttctgggatatatagtgctggcagatgaagtgctccatctttctgtaatt
tctgactttaagaatgacttagttgaagtgatggtacttcttaatgtagcagaggtccaa
caagcaagactggaaatttttcgtctgtcttcagcaatgataacagataatgataagtat
gtgaatgaacaaggaatgtttaatgctagtgacctgaaaaagaagcaatatgatctggat
ttccctttgagctcagcagtcagactgaaggataacactgtgtatggctactgctcctgt
gcacctttcatctgtaaataccacctctctgaagagaataagtttcaagatacatcagta
ttttcatctgaaaagaagattcctagcaaacagtttggatcaggtttgctctgtttatca
cccaacagccagtggctggcagcatcagccaaggatggtgttttgtttatctacaattct
tctactctggatatacttgctcaaaagcattgtcactcatatcaaggagggggaatcaga
tccatggtattctccctggacggcaatttcatcctagttaacggtgaaaatgattgtgcc
ctggtgtgtctgaagtggaaggagataaagaaagttcctggagttgaggaagctgctctt
tactggaagtctctgcgtgatatactgaacaagtctacttcagatgaaaattctgtttta
aaatctatggcagaatggaagttggacccagaatccacatcaaaatcactttcagtgaca
gaagaagatggagacatcacaaatactgatggcacaacatggataggccagaaaacacag
aaggttatgagagaagagacgcggatgtttgctaaccagaaggaagagctgcaaatggga
attagaaagctgcgtgaaactattcagaaaatgatgcatgaaaatgagcaggtgccagac
attgagaaactcgaactctgggagttcaacctggatttagaagaacaggaacaagcgcaa
gcagaagctgaagaagatgtggccagggcaaggagagagattgagatggagattttatcc
tactgctatttgcaggatttaatcaaatatgagtgctgggatgacatgtgtgtaaaagaa
cgtgcagttaagtgcttccatagggattgtgaagtgaggaattatccactgaaggaacgt
agtaaagaagagatggaaactttgaagaaagttctccagttaaagcagactgagacagct
gatcttcaggctcagaaggaaaatcttgactctgagactgctttatctgaggaaggagag
aaggcagcaggagcagtgactgatgatggtgcatctttctgcctaaatggaagcctgagc
tctcagtatggtggggacacatctatcctataccaccaatgtgacctgcacacaaaggag
cagaaactcaatcagacaatattattgaaggacgtcatttacaaagtgaaaactgctttt
aatgaggaatttgacatggttgtacaacgaaaggagcaggagatagcacgagtgaaagaa
agaaacctgaagatccaagaaatcttggagcagcttgaccttcaagtggaagtgtgggag
ccagtccttacagatgaggagatgccggagcgagtgctcactgttcaggattcagagatt
aaagctgagaaatacatgactcaagaggagaaagagcaggcagagatgcaggctaagctt
gaaatggaaagacgcctggctgctacagacgatgaaagactgcgtgctcttgatgacatg
atgggtggagtgctggaaatcaggagggaagacattttgaaaatggatattcctccacct
gattttgtatccagacctgaggatctttggactgaagaagaaaagaaagtatttgaagaa
tatgagaaaaaagtcaaggaattgaatgaagaaaaagaagattatagacagtttctgaga
aatgaatggaacaaaattgaagcttccatcaaggaaacaacacaaaattttgatgagatt
gtctgcaaactctctgaaaagaaactgaaatcacagatggtcatctaccaggaagaactc
aaaatagtcaatctcatttattctttactgttggatgaagagttggacaccagagaatct
ggacttcataaattccttatgaaaaagaaaaaagaaaaagtcaagggtgcaagaaaaatc
ctgagtgcaaaacatggtgttgaggcttgcacaggcccctataaagaggcattacatgaa
gagaagagcctggaacatggttttatgaagcggtttgctcatatacctggcaatctcttt
gaggagcttttacaactttacaaacatcgaccagagaccccaaatacagaaaccctcctt
gacacagctaacccctatgtgaagggatcacctgaggattaccaagatgcagtttccctt
ttaatgaaagccatggatgaagtggatagtcctgagcacaagcctagtggcttagaccag
tccatgtgggaacatttttgtctagctagacgaaataaaatcaagaatgaggagctggtg
aaatggaaggccctagcactgtcagagatgcagacctgtctccggagaagaaccgatgaa
aatgacaagatgaaatcagaattagagaacactttccaagagctcacttggctgaaggag
gagaagatgaagcttcagcagaatttgactgtccagtttttgctaaaacaaggacaggtg
gaattggaaagtactcagatcccagagtacagtgatgctgttctcattgataggagtgtt
gttgaggagctgaattgctctcttgcggctcaaggagaaaaaaaaattactgccatggta
gaatttaaggatttctctaaagagataatacagctggaatgggaacacaagaaaatgaaa
atgcagatacaagatctgaaagagaaggctcgggatattgtaatcctacccatttcaaaa
gattgccagctattcctaactgtgcataactacgagacccacattgctcagcatctgtca
gggatggagcagagccttggcatcatggataagttgcacaagaagaatgtgagaaaccat
cagaaaaaagtcagagagctgaagaagtgcatctgtctaaaagagcaagagaactacgag
ctcagcctgcagctgaaggaaatgcttgtctctgtgtcagaaaggatgcacatctttgag
gcagctgacacacgggatatttctgaagagatcacaaggcagcgttaccaagagattgtg
aagcagaaatatctacggaaccttataagggaacaggaaaaacagcttgcaattcttcaa
tcagaaattgaaagctggaatccaagaacactccatattatttaa
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integrated database retrieval system
