Pyrgilauda ruficollis (rufous-necked snowfinch): 121350153
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Entry
121350153 CDS
T07608
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121350153 (SORCS1)
Membrane trafficking [BR:
pruf04131
]
Protein recycling
Others
Others
121350153 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
121350153
NCBI-ProteinID:
XP_041317158
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MEKVAGWYPAWHVALLYWTWLFLFTYGFTGAEITCRSCRSQVQPQQQPQQGLLMHLRTDR
GEKEQRRFLGEKGGERGQEAGTEDAGLQATLAPASAGMKFSGWETRRVTREPEKVAGERR
PRAAAAAPAEDRPLQGPPRAGRPGAVRRRWGXXXXXXXPGDGGAARFGLEELRLASTTFA
LAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGL
KTILSYLYVCPTNKRKIMLLTDPEVESSLLISSDEGATYQKYRLNFYIHSLLFHPKQEDW
ILAYSQDQKLFSSVEFGRRWLLLHEGVTPNRFYWSMMGNGREPDLVHLEARTVDGHAQYI
TCKMQNCSEATRSKPFPGYIDHNSLIVQGDYVFVQLTSGGRPHYYVSYRRSPFAQMKLPK
YSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLALENVKSSQGLEGNVM
IDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWSLLQAPHTDLRGNPIHCLLPYCSLH
LHLKVSDNPYTSGNIASRDTAPSIIVASGNIGSELSDNDISMFVTSDAGNTWRQIFEEEH
SVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSLPLFVDGVLGEPGEETLIM
TVFGHFSHRSEWQLVKVDYKSIFDRRCEEEDYRPWQLHSQGEACIMGAKRIYRKRKSEKK
CMQGKYAGAMTSEPCVCTEADFDCDYGYERHSNGQCLPAFWYNPSSLSKDCSLGQSYLNS
TGYRKVVSNNCTDGVRERYTAKPQQCPGKPPQGLRIVTADGRLTAQQGHNVTFLVQLEEG
DLQRSLIQVDFGDGIAVSYANLSSTEDGIKHIYQNVGIFRVTVLVENSLGSDSAVLYLHV
TCPLEHVHLSLPFVTTKNKEINATAVLWPSQVGTLTYVWWFGNNTEPLITLEGSITFTFS
VEGMNTITVQVSAGNTILQDTKTIAVYEKFQSLRLSFSPNLDDYNPDIPEWRRDISKVVK
RALVEATGISSKHVLIAVLPGLPTSAELFILPYQDATGEKKRTASNLEQISETLIQKLNQ
NLVHFELKPGVRILVHAAHLTAAPLVDLTPSHSGSAMLMLLSVVFVGLAVFVIYKFKRKI
PGLNIYAQMQNEKDQEMVSPVSQRESIPNVPQSEMMSPEQLVDEKLEVHPIEQPQATVPN
PRKGNATKVVWTEDFQKACGSPRDFKPRPRAEVFPQLLSPRAQKKSLPM
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcctggcacgttgctctcctgtactggacatgg
cttttcctcttcacttatggctttaccggtgcagaaataacttgcagatcctgccgttcc
caggtgcagccgcagcagcagccgcagcagggattactgatgcacttgaggaccgacaga
ggagaaaaggagcaaaggaggttcctcggggagaaaggaggtgagcgagggcaagaggcc
ggcacggaggatgccgggctgcaagcgaccctcgcccctgcttccgcggggatgaaattc
agcggctgggaaacacggcgagtgacgagggagccagagaaagtggccggggagcgccgt
ccccgggcggcagcggcggctccggccgaggaccgacccctccagggccccccccgggcg
ggccggccgggcgcggtgcggcggcgctggggccnnnnnnnnnnnnnnnnnnagccgggg
gacggcggcgccgcccgcttcgggctggaggagctgcggctggccagcaccaccttcgcc
ctggccggagactcggcgcacaaccaggccatggtgcactggtccggccacaacagcagc
gtgattctaattctgacaaagctgtatgactacaacctgggaagcatcacagagagctct
ctttggaggtcaacagattatgggacaacatatgagaaactgaatgataaagttggtctg
aagactattttgagctacttgtatgtttgcccaacaaacaaacgtaagattatgctgctg
actgatccagaagttgaaagcagcttattaatcagttctgatgaaggagccacctatcag
aaataccgtctgaacttctacatccacagtctgctcttccaccccaaacaggaagattgg
atcttagcctacagccaagatcagaagttattcagttctgtggagtttggcagaagatgg
ctgcttcttcatgagggagttacacccaacaggttctactggtctatgatgggcaatgga
agagagcctgaccttgtgcacctggaggcaaggacagtggatggtcatgcccaatacatc
acctgcaagatgcagaactgcagtgaagccactcgcagcaaaccctttccaggctacatt
gaccataactccctgatcgtccagggtgattatgtctttgttcagctgacatcaggagga
agaccacattattacgtttcttataggaggagcccatttgcacagatgaagctgccaaag
tactccttacccaaggacatgcatgttatcagcacagatgagaatcaggtgtttgcagct
gttcaagagtggaaccagaatgacacgtacaatctgtacatctctgacacccgagggatc
tacttcaccctggccttggaaaatgtcaagagtagtcaagggctggaggggaatgtgatg
attgacctctatgaggtagcagggataaagggaatgttcttggctaacaagaagattgac
aaccaagtgaaaactttcatcacctacaataaagggagagactggagtttgctgcaggct
ccacacacggatctgaggggaaatcccattcactgtcttctaccctattgctcccttcat
cttcacctgaaggtgtcagacaacccctatacctcaggaaacatcgccagccgagacact
gcccccagtattattgtagcttcaggtaatataggcagtgagctatcagacaatgacatc
agcatgtttgttacttctgatgctgggaacacttggaggcagatctttgaggaagagcac
agtgttctgtacctggatcaaggtggagtacttgttgccatgaaacacacatctctgcct
atcagacacctctggttgagttttgatgaagggagatcttggagcaagtacagtttcaca
tccctcccactgtttgtagatggagttttaggggagcctggagaggaaaccctcatcatg
actgtgtttggacacttcagccaccgctcagagtggcagctggtgaaagtagactacaag
tccatctttgatcggagatgtgaggaagaggactacaggccttggcagctccacagccag
ggagaagcctgcatcatgggagcaaaaaggatctacaggaagcgcaagtcagagaagaaa
tgcatgcaagggaaatatgctggggctatgacctcggagccctgcgtgtgcacagaggca
gactttgactgtgattatggatatgaacgccacagcaatggccagtgtttaccagcattt
tggtataacccatcctccttgtcaaaagactgcagccttggacagagttacctcaacagc
actgggtaccggaaggttgtttccaacaactgcacggacggggtgcgggagaggtacacg
gccaagccccagcagtgcccgggcaaacctccccagggcctccgcatcgtcacggccgac
ggccggctcacggcccagcagggccacaacgtcaccttcctggtgcagctggaggaggga
gacctccagagatccctcatccaggtggattttggggacggcatcgctgtgtcatatgcc
aacctcagctcaacagaagatgggatcaagcacatctaccagaacgtgggcatattccga
gtgaccgtgctggtggaaaacagcctgggctctgacagcgctgttctctacctgcatgta
acgtgccccttggaacatgttcacttatctctgcccttcgtcaccacgaagaacaaggag
atcaatgccacggcagtgctgtggccaagccaagtgggaacactgacttacgtctggtgg
tttggaaacaacacagagccactgatcacattggaagggagcatcacattcacattttct
gtggaagggatgaacaccatcactgttcaggtctcagcaggaaacaccattcttcaggac
acaaagactattgcagtgtatgagaaatttcagtccctgaggttatcgttctctccaaac
cttgatgactacaacccagatatcccagagtggagaagggacatcagcaaagtagtcaag
agagctctggtggaggctacaggtatttccagcaagcatgttctgattgcagtgctccct
ggcctgcccacatctgctgaactcttcattttaccatatcaagatgccacaggagaaaaa
aaaagaacagcatcaaacctagagcagatttcagaaacactgatccagaaactgaaccaa
aacctggtccattttgagttgaagccaggagttcgaatccttgtccatgctgcccattta
acagcagctcccctggtggacctcactcccagtcacagtggttcagccatgctgatgctc
ctctctgttgtttttgtgggactagctgtgtttgtcatctacaaattcaaaaggaagatt
cctggccttaatatatatgcacagatgcagaatgaaaaagatcaagagatggtcagtcca
gtcagtcagagggaaagcatacctaatgtccctcaaagtgagatgatgagccctgagcaa
ctagtagatgagaagttggaagtccaccccatagagcaacctcaggccacagtcccgaac
ccaaggaaaggaaatgcaaccaaggtagtctggacagaggacttccaaaaagcttgtgga
tcaccaagagatttcaagccaagacccagagcggaagtatttccacagctgctgagcccc
agagcacaaaagaaatccctacctatgtaa
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