Pyrgilauda ruficollis (rufous-necked snowfinch): 121350175
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Entry
121350175 CDS
T07608
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04110
Cell cycle
pruf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121350175 (SMC3)
04114 Oocyte meiosis
121350175 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121350175 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121350175 (SMC3)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121350175 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
121350175 (SMC3)
Proteoglycans [BR:
pruf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
121350175 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
121350175
NCBI-ProteinID:
XP_041317196
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctctaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttgttgcatgaaggtacaggtcctcgtgttatttcggcatttgtggagatt
atatttgacaattccgacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagattgaagttactaaga
gaagtagctggtaccagagtgtacgatgaacgtaaagaggagagtatttcactaatgaaa
gaaacagagggcaagcgagagaaaatcaacgagttgttgaaatacattgaggagcgactg
catactctagaagaggagaaagaggagctggcacagtaccagaaatgggataaaatgagg
agagcattagaatacaccatttataatcaggaacttaatgaaactcgagctaagcttgat
gagctttctgctaaacgagagacaagtggagaaaaatcgaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttctgcaatgaaagaagagaaagagcaacttagtgctgaaagacaggagcagattaaa
cagaggactaaattagagctgaaagctaaagatctgcaggacgaattagctggcaacagt
gagcaaaggaaaagactgctaaaagagaggcaaaaacttcttgagaaaatcgaggagaag
cagaaagaattggccgaaacagagccaaaatttaacagcgtaaaagaaaaagaagagagg
ggaattgctagactcgcacaggctacacaagaaagaacagacctttatgcaaaacaaggt
cgagggagccagtttacttccaaagaggaaagggataagtggataaagaaagaactgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggactta
gaggatacagaggcaaacaaggagaaaaacttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaattggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagtgaaagaaattacctatggagagaagagaatgcagaacag
caagctcttgctgcaaagagggaggatctagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttttggagcacttccgt
cgaaaaggcataaaccagcatgttctgaatggctatcatgggatcgtgatgaataacttt
gaatgtgaaccagcattctacacctgcgttgaagtcactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctttgaacaagctggatgttagagatactgcttat
cctgagactaatgatgcaattcctatgatcagtaaactgagatacaatccaagatttgat
aaagctttcaaacatgtttttgggaagactttaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcacaatggattgtatcactctggaaggtgatcaagtcagccat
cgaggtgctttgactggaggttattatgataccaggaagtctcggcttgaattgcaaaaa
gatgttagaaaagcagaagaggaacttggtgaacttgaagcaaagctcaatgaaaactta
cgtagaaacattgagaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgaaacacagcagagaaaattcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaagaggcagcagtctgaaaagacatttatgcctaagcaacgtagcctg
cagagcctggaggcaagtttacatgccatggagtcaacaagagaatcattaaaagcagaa
ctggggactgatttgttgtctcagcttagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcgacaactacagcaagaaaacagacagcttttgaatgagaggattaaa
ttagaaggcattatcacaagagttgaaacatacctcaatgagaatctgagaaaacgcttg
gaccaagtggaacaagaactgaatgagcttcgagaaacagaaggtggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaggatacactggcacggtca
gatgatctggataactctattgacaaaacagaagcaggaattaaagaacttcagaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgctattaaccatgatacaaaa
gaacttgaaaaaatgacaaacaggcaaggcatgcttctcaagaagaaagaggaatgcatg
aagaaaatacgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttatttcgcaagctggagcagtgcaatactgaactgaagaaatacagt
cacgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaggaactggacaggggctacaaatccatcatggagctgatgaatgtc
cttgagctcaggaaatacgaggctattcagctgactttcaagcaggtgtcaaaaaatttc
agtgaagtattccaaaagttagtacctggtggcaaggccacattggtgatgaagaaagga
gatgtggaaggtagtcagtcccaggatgaaggtgaaggcagtactgagagcgaaagggga
tctggatctcagagcagcgttccatctgtagatcagttcactggagttggcataagggta
tcattcacaggaaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tctctagtggccctggccctaatatttgccatccagaaatgtgatccagctccattttac
ttgtttgatgaaattgaccaagccttggatgcccagcatagaaaagctgtgtcagatatg
attatggaactagctgaacatgctcagtttattacaacaacttttaggccggagctgctt
gagtcagctgacaagttctatggtgtaaaattcagaaacaaggtcagtcatattgatgtg
atcacagcagaaatggccaaagacttcgtagaagatgacaccacacatggttaa
DBGET
integrated database retrieval system
