Pyrgilauda ruficollis (rufous-necked snowfinch): 121350269
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Entry
121350269 CDS
T07608
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pruf03016
]
121350269 (TRUB1)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
121350269 (TRUB1)
Transfer RNA biogenesis [BR:
pruf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121350269 (TRUB1)
Prokaryotic type
121350269 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
121350269
NCBI-ProteinID:
XP_041317394
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MAGEAGGAALGRAADKLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTKGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGSMLTGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECGGGFYVRSLVNDIGKELSTCASVQELTRTKQGPFTLEEH
ALHEDKWTIDEIAQSLEHCTALLLGEPARKKLKTEHPGETAVICEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgttgggccgcgcggccgacaagctcttctcgctc
agcgggctcttcgccgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaaagggaacaaaagaaatcag
gttttgaaaattggacatggaggaactttggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctggggtctatgttgacaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaagtaacaaaaggagatcttgaaaatgttctgcaaaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaagcagtagaagcaaagcctgctcggccggtgagagtg
tacagcctgtctctccagcagttccagccaccactgttcacgctgggtaaagatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctccacc
tgtgcctcggtgcaggagctgacgcgcaccaagcaggggccgttcacgctggaggaacac
gccctgcacgaagacaagtggacaattgatgaaattgctcagtccttggagcactgcaca
gccctgctcctgggagagccagctcggaaaaaattgaagacagagcatccaggtgaaact
gctgtgatctgtgaggataagtga
DBGET
integrated database retrieval system
