Pyrgilauda ruficollis (rufous-necked snowfinch): 121350485
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Entry
121350485 CDS
T07608
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121350485 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121350485 (MBD4)
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121350485 (MBD4)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
121350485 (MBD4)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121350485 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
DUF4407
Motif
Other DBs
NCBI-GeneID:
121350485
NCBI-ProteinID:
XP_041317795
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
GPGTARHGPARLGTPGAERGADSAGPAPGPGGGPCPGPPRRPRSSAGSSTLPGLFFPCSP
GGSSRGAAAERPGPSPGCGDHGPAGPSAVPRGWQRVSSRRRAGRTAGRVDVYFVSPEGKK
LRSKRALVEYLQKTGETTLKAADFDFAAPRGSTRSGLRGYGTGAARTDLEKEDCQSKVQE
LHAQNGAEAGIQNIQAGSERLEDAASAVEGTDLVVTGKVPAAGDLGERSAGSDSELEAEP
WGRTSFAAARMSAEESVPRTQVERRKTSPYFSSKYSKEAPSPPRRKALRKWTPPRSPFNL
IQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMSELLKPLG
LYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYH
TWLWENRERLSID
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ggacccggcacggctcggcacggcccggcacggctcggcacgccgggagcggagcgcggg
gcggacagcgccggcccggccccggggccgggtgggggtccgtgcccgggcccgccccgc
cgtccccggagctccgccggcagcagcaccttacccgggctcttcttcccctgcagcccc
gggggcagcagtcgaggcgcggcggcggaacggcccggccccagccccggctgcggcgac
cacggcccggcggggcccagcgccgtcccccgcgggtggcagcgggtgagcagccgcagg
cgggcgggaaggacggccgggagggtcgacgtgtacttcgtaagccctgaagggaagaag
ctgaggtcaaaacgagcacttgtggagtatttgcagaaaactggggagacaacactgaaa
gcagcagattttgattttgcagctcctcgagggagcacacgctcaggactgaggggatat
ggcacaggagctgcgaggactgacctggaaaaggaggattgtcagagcaaagtgcaggag
ctccatgcacagaacggtgctgaggctggcattcagaacatccaggctgggagtgaacgc
ctggaagatgctgcatctgctgtggaaggcacagatctagtagtgacagggaaggtgcca
gctgcgggggacctgggtgagcgcagtgctggatctgacagcgagctggaggctgagccg
tggggcaggacgagcttcgcagcagccaggatgtcagcagaagagtctgtcccacgaaca
caagtggagagaaggaaaacaagtccatatttttccagtaaatacagcaaagaagccccc
agcccacccagaaggaaggccctcagaaaatggactcctccccgttctcctttcaatctt
atccaggaaacactcttccatgatccgtggaagcttctcattgccaccatatttctcaac
aaaacttcagggaaaatggccattccagtgctctgggagttcctgaagaagtatccttct
cctgaggtagccagggctgcagactggaaagaaatgtcagagctgctcaaacctcttggc
ctctacgaactcagagccaaaaccatcatcaggttctcgggtgagtacctgagcaaggcg
tggcgctaccccatcgagctgcacggcatcggcaagtacggcaacgactcctacaggatc
ttctgtgttaacgaatggaaggaggtgcagccacaggaccacaagttgaacgtgtaccac
acgtggctgtgggagaaccgggagaggctgagcatcgactga
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integrated database retrieval system
