Pyrgilauda ruficollis (rufous-necked snowfinch): 121350642
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Entry
121350642 CDS
T07608
Symbol
OGG1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121350642 (OGG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121350642 (OGG1)
Enzymes [BR:
pruf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
121350642 (OGG1)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121350642 (OGG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
121350642
NCBI-ProteinID:
XP_041318066
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MKLRDAPSVCPSLWRWLPCPPAELRLDLVLSSGQSFRWWESSPGAWTGVLGGRVWTLRQD
GDRLWYTVYGEEEEEGDECPAKAAKLNAAETDRILRDYFQLDVGLSALYHAWGAADPLFR
KVANDFPGVRVLRQDPVECLFSFICTSNNHISRITAMIERLCQAFGRHLCCLDSRPFHAF
PSLSALTGADAEARLRALGFGYRAKFVSGSARAIAEGLGPEGLCQLRTAPYAEARRVLCA
LPGVGAKVADCVCLLSLDKAEAVPVDTHVWHIAQQRYGVALGGKSLTPRAYQEIGVHPLS
AGDFFRGLWGPRAGWAQAVLFCADLRKGQKPAGSQHQA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgggacgccccttccgtctgcccgtccctgtggcgctggttgccgtgcccg
ccggccgagctgcgcctggacctggtgctctcctcgggacagagcttccggtggtgggag
agcagcccgggggcgtggacgggtgtgctagggggccgcgtctggacactacggcaggac
ggggatcggctctggtacacggtgtacggcgaggaggaggaggagggggatgagtgcccg
gctaaagcagcgaagctgaacgcggcagagacggaccggatcctgcgtgactacttccag
ctggacgtggggctgtcggccctgtaccatgcctggggggcggccgaccccctgttccgc
aaggtggccaatgacttcccaggggtgcgagtgctgcggcaggaccccgtcgagtgcctc
ttctccttcatctgcacctccaacaaccacatttcccgcatcactgccatgatcgagcgc
ctctgccaggccttcggccgccacctctgctgcctcgattcccggcccttccatgccttc
ccatccctctcggcgctcacaggtgctgatgccgaggcccggctgcgggcgctgggcttt
gggtaccgggccaagtttgtcagtgggagtgcacgggccatcgctgaggggctcggcccc
gaggggctgtgccagctccgcaccgcgccctatgccgaggccaggagggtgctgtgtgcc
ctgcctggcgtaggtgccaaggtggccgactgtgtctgcctgttgtccctggacaaggcg
gaggcggtgcctgtggacacccacgtctggcacatcgcacagcagcgctatggcgtggcg
ctgggcggcaagagcctcaccccccgggcctaccaggagatcggtgttcaccctctttcc
gcaggcgacttcttccgggggctgtggggccctcgtgccggctgggcacaggcagtcctg
ttctgtgccgacctccgcaagggccagaagccagccggcagccagcatcaggcctga
DBGET
integrated database retrieval system
