Pyrgilauda ruficollis (rufous-necked snowfinch): 121350674
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Entry
121350674 CDS
T07608
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121350674 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pruf01001
]
121350674 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pruf04054
]
121350674 (CIITA)
Enzymes [BR:
pruf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121350674 (CIITA)
Protein kinases [BR:
pruf01001
]
Serine/threonine kinases: Other
TAF1 family
121350674 (CIITA)
Pattern recognition receptors [BR:
pruf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121350674 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
LRR_14
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
121350674
NCBI-ProteinID:
XP_041318124
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MITRQHVVVCDETKRQTMDSVFVPENGYLDLLHSDIDPLHLCTFFDPKSSGDEEGDFSTD
LEVDASNYEQLNNMDFPYENGDGFYPCCNTTDAYAKIAELVEYVLKDQQEKQVEDIFAGN
LILDDIAAENTEKFPDIKMQSCLKRTFLGSAAESYCDASEPKYKKTVEVPAASAGNGSFF
AMPLNSHPVSCTSLTNQHMSCSVPAAHGLERSLIIPGLSEPLTSECLPVSVKGYQENPGL
AGPPQQIFNFVLENGTSDVIVYPVLTSSMETFMSPNFPVNLCDLEKFQETQDSIIPSEEP
FKRPEQVETFCSSLKDYFRDTCKSVTMEREVNLDHLFIDGTLVQSQTETKTGKNSAKAME
KELVTCSLQEKEKTAIVRSQIFQIPQRKDLETKVIVVLGKAGMGKSILVQKICQDWSNGE
FSQFEFVFWFDCKQISLPEKQYSLKELLLEFFVKPQEGSKEIFEYILQNPDKVLLIFDGF
KGLHDHENFPRCSASQPEKDLCSIKELLSGLIQKKILNGCTLLFTARPKDKLYQYVSKVD
KTIEMVGFSPQQRELYITKYFEESLYCDSALKLIRECEYLFSHCYSPVMCRFVCFLCETV
LEMGEKSLPSTLTGVFLKFFQQKIMFMQTDVTTTQNQESLATLARVAWCLGEKHQSAMKS
DLIPSKEVKEFALKYGFFLPFAFPRHSDSEEEEFGSTFSDFVIQNFLCALHLLLAEELKD
KNLTKYLSFLSKKKKPYNWLDLMPRFLAGLMFLQDDPYFCSLSKEVEKQSTKKQKTLLKY
IRRLQINSLCPERLLELLCCVYETQNNYLLQHVALRLEPDLSFLGIVLTPPDVHVLHSIL
KRSRKEFFLDLRNSSIDMQGLQALVSLRNVTSFRASLSDTVRLWKSLEQTKDYELLKVST
EKFVLDPFKAKTMKDISDLSDLVEMQEKMMNCVQEASGCTSYEIPAIRNLRKVEFALGPA
CGLQGLLKLVKILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKI
TDLGAENLAAALPSLSSLKTLSLYNNSICDFGAENLAKVLPAMKSLRVLDVQYNKITGVG
AQQLTDSLRKCPHIKNLVMWNPTIPYGVLEHLHQLDSRISV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgataacaaggcagcacgtggtagtgtgtgatgagacaaagagacaaaccatggattca
gtatttgtgcctgaaaatggctaccttgatttactgcacagtgatattgacccattgcat
ctgtgtactttctttgatcctaagtcatctggagatgaagaaggtgacttctctacagat
cttgaagttgatgccagcaactatgaacagttaaataatatggatttcccatatgaaaat
ggggatgggttctacccctgttgcaacaccacggatgcttatgctaaaatagctgaatta
gtagaatatgtgctcaaggatcagcaggagaagcaggttgaagacatttttgcagggaac
cttattttggatgacattgctgctgaaaacactgagaaatttcctgacataaagatgcag
tcatgtcttaaacgaactttcttaggctctgcagcagaaagttactgtgatgcttcagaa
cccaaatataagaaaactgtggaagtccctgcagcttctgcagggaatggcagtttcttt
gctatgcctctcaacagccacccagtgagctgcacctccctaactaaccagcacatgtcc
tgttctgttcctgctgcccatgggctggaaagaagcctcataattcctggattgtcagaa
cctttgacctcagagtgcctaccagtcagtgtgaaagggtaccaagagaacccaggcttg
gcaggtcctcctcagcagatatttaactttgttcttgaaaatggcacatctgatgttata
gtatatccagtgctgacatcttccatggaaacattcatgtctccaaattttccagttaat
ttatgtgatttagagaaatttcaagaaactcaagattctataattccttctgaagaacct
tttaaaagaccagagcaagtggaaactttctgttcatcccttaaggattatttccgagac
acgtgcaaatctgtgaccatggagcgggaagtaaatctggatcacctcttcattgatggg
acacttgttcaaagtcaaactgaaaccaagactggaaagaatagtgcaaaagcaatggaa
aaggagctggtaacctgcagcctgcaagagaaggaaaagacagccattgttagaagccaa
atatttcaaatcccacagcgtaaagacttagagactaaagtgattgtggtgctgggaaaa
gcaggaatgggcaaaagcattcttgttcagaagatctgccaggactggtccaatggagag
ttttctcagtttgaatttgtattttggtttgactgcaaacaaataagcttgcctgagaag
caatacagcctgaaggaactgctgcttgaattttttgtaaaacctcaagagggaagcaaa
gagatctttgagtatatcttgcaaaatcctgataaagtccttctgatttttgatggtttt
aaagggttgcacgatcacgagaattttcctcgttgctcagccagccagcctgaaaaggat
ttgtgcagtataaaggagctgctttcaggactcatccaaaaaaagatactcaatggctgt
actttattatttacagcaagaccaaaagacaaactgtaccagtacgtgtccaaagtggat
aagactattgaaatggtaggattttcccctcagcagagagaattgtacataaccaaatac
tttgaagaatcgctgtactgtgatagtgcactgaaattaatcagagagtgtgagtacttg
ttcagtcattgttacagccctgttatgtgtaggtttgtttgttttctctgtgagacagtg
cttgaaatgggagagaaaagccttccttcaactcttactggagtcttcctgaaatttttt
cagcagaagataatgtttatgcaaacagatgttacaaccacacaaaatcaagagagtctt
gctaccttagctcgtgtagcctggtgtcttggagaaaagcaccaaagtgccatgaaaagt
gatcttattccttctaaggaagttaaagagtttgctctgaagtatgggtttttcctgcca
tttgcattccccagacattcagatagtgaagaagaggaatttgggagcacattctctgat
tttgtcattcagaatttcttgtgtgcacttcaccttttgttagcagaagagctcaaggat
aaaaatctaacaaagtacctgtcttttctatccaagaagaaaaaaccttataactggtta
gatttaatgcctcgatttttggctggtttgatgtttctccaggatgacccctacttctgc
tctctttcaaaagaggttgaaaaacaatcaaccaagaagcagaagacactcttgaaatac
atcagaagactgcagattaatagtctctgtccagagaggttgctagagctgttatgttgt
gtttatgaaacacagaacaattatcttctgcagcatgtggccttaagacttgagccagat
ttgtcttttctgggcatagttcttacaccacctgatgtccatgtactgcactctattttg
aaaaggtcaagaaaagagtttttcttggatttacggaacagcagcattgacatgcaaggg
ctgcaagccttggtcagcctaaggaatgtgacatcgttcagggcttctctcagtgacaca
gtcaggctctggaaatctttagaacaaacaaaagactacgaactgctgaaagtgtccaca
gagaaatttgttcttgatccctttaaggcaaagacaatgaaggacatcagtgacctctcc
gaccttgtagagatgcaggagaagatgatgaattgtgtgcaagaagcatctggttgcacc
agctatgaaattcctgccatcagaaacctcagaaaagtcgaatttgcactgggtccagca
tgtggccttcaaggattgctaaaactcgtgaaaattcttgcagcatttccatcacttcag
catttagaccttgatgctctgagtgaaaatggcataggagatgaaggagcaaagagtctg
tctgaagtgtttccaaccctgacatcactggaaacattaaatttatcacagaataaaata
acagacctgggtgcagagaacctcgctgcagctctcccttccttgtcttccttaaaaaca
ctaagcttgtacaataacagcatttgtgattttggagcagaaaatctggcaaaggttctt
cctgcaatgaaatctttaagagtgctagatgttcagtataacaaaataactggtgttgga
gcccagcagctgactgacagcctacgcaaatgtccccatataaagaacctggtgatgtgg
aatcccaccattccctatggagttcttgaacaccttcaccagctggactccaggatcagt
gtgtag
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integrated database retrieval system
