Pyrgilauda ruficollis (rufous-necked snowfinch): 121350693
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Entry
121350693 CDS
T07608
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121350693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
121350693
NCBI-ProteinID:
XP_041318162
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MDLLVLAFLLVGGLVAGGWQEPDLSHGCARGSCYPATGNLLVGRATRLSATSTCGLDGPQ
EYCIVSHLQDSEKCFTCDSRDPSLPESHRIENVIYLSSPHEKRTWWQSENGVEHVSIRLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGHTWKVYRYFAYNCSKLFPGIPSHALGLVD
EVLCDQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPAIQDLLRVTNLRVNLTKLHTLGDN
LLDSRREVLHKYYYAVDELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQ
GLNCERCEDFYHDLPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDDC
QHNTMGRRCHLCKPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQ
CRCKENVAGPRCDRCRHGAYGLSHDDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFV
AGRSCSQCVPEFWGLSYDLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQP
GFFCAPLDYYTYEAEQATGHGHSHPQLPGAIRVEVPQDCLEYDTREPAGRKGRSRRQRSP
LRAPQPPVPPRRSRQQPPKLDVEEVVRDSAGRMVTWTGLGFARVRDGAGLTFRVDNVPYP
MDYELLLRYEPESAEDWEAVVSVSSQVLPTSSRCGNLLPSEQMYRQSLPHSQRYVLLSRP
FCFEPSTPYEVTMRLQRAGVTQRHPGAFILIDSLVLLPRVSELPGFHGAEAAARQEELER
YQCLEVFRMAPPHPLAEACARLVCSVSALMHGGALPCQCDPQGSRSSECQVQGGQCECKP
HVTGRRCDHCAPGSFGFGPLGCSPCTCSPEGSVSQLCDKVSGQCRCQPGTVGRQCDQCQP
GHWGFPACRPCQCNGHAEECDPRTGTCLRCRDHTSGRHCERCQDGYYGNPVLGSGQQCRP
CPCPGYPGTRNYHGSACHADDETHHIVCLCAPGYAGPRCDRCSPGYFGAPEMEGGECRPC
QCNNNIDTSDPEGCDPRTGQCLRCLYHTAGPRCAQCQPGYYGNALQRSCRRCGCDPRGTL
ASHCTDGTCDCDRGTGACACRPNVVGKSCDRCAPHFWNLGGPRGCEPCGCHPIHALHPAC
DTVTGQCQCRPGFGGRVCSQCQEHHWGDPEQECRACECEPLGAESPQCEQDNGQCRCRLG
FGGLRCDRCQRGYQEPFPHCSPCHPCFGRWDLAVGSLREGLQRLGAQVQALREGSSALPL
SPRRLRELEEALGHVEQLLGERDSSRGPLLDGLPRQLDGTRMELDNFWKHLQELEQHLDQ
LAQADMQHHDRLAELSRELGDLNRTTSHLQILLGTVAAAGFSESYRSILASTEASRQAEV
VANGTAGELSRAQMTQRATERALQQRGDTFRRGTAAARKSLRETQKRVMGLSIARINEKI
CGAPGDRSCKHASCGGALCRDSAGTRHCGGVGCAGALPISARALSSAHNASQQLEVALGQ
LGVVAQKMQEVQELARGARSRAEEALGRSQAARSRAEKATAQLRDFIRRIKAFLAEEGAD
PGSIELVARQVLNISLPSSPGQIQELLLEMRESISQLEGVDAVLNSTAEGLAVARDLLAQ
GQEARERAEGIRDELAGTQQALEVARTQAMTAGSALQRARNAIQVAENRAREAERRLQVL
DRKESQAQRRLRELAQRIATLQEHGRDARHMAQQAKDGAQRSTATSGTLSQDLAQVTQRY
VVLKNRVGMLDRVSGGALQRVSQLMAEVQDLLDKASNSKRKLEDLEQRFGANERTMAAKV
TRLQALEQQVTGLLQEIRERANAYATC
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggacctcttggtgcttgctttcctcctggttgggggactggtggcagggggctggcag
gagcctgacctgagccacggctgcgcccgcggcagctgctacccagccactgggaacctg
ctggtggggcgagccactcgcctgagtgccacctccacctgtgggctggacgggccccag
gagtactgcatcgtcagccacctccaggactcagagaaatgtttcacctgtgactcacgt
gacccatccctgcctgagagccatcgcatcgagaatgtcatttacctgagcagcccccat
gagaaacggacctggtggcagtcggagaatggtgtggagcatgtcagcatccgcctggac
ctggagggcgagttccacttcacccacctgatcatgaagtttaaaaccttccgccccgcg
gccatgctagtggagcgctcagctgactttgggcacacatggaaagtgtaccgctacttc
gcctacaactgctccaagctcttccctggaatccccagccatgccctggggcttgtggat
gaggtgctgtgtgaccagcgctactctgagattgagccgtccagccatggggaggtcatc
ttcaaggtgctggacccctccatccccgtagcagatccctacagcccagccatacaggac
ctgcttcgtgtcaccaacctgcgggtgaatctcaccaagctgcacacgctgggggacaac
ctgctggactcacggcgggaggtgctgcacaagtactactacgctgtggatgaactggtg
ctgcgcgggagctgcttctgccacggccacgctgcccactgtgccccagcaccgggtgcc
ccgacaccctctgtccccggcatgatccacgggcgctgtgtctgcgagcaccacacgcag
gggctgaactgcgagcgctgcgaggatttctaccacgacctgccctggcgcccggccgag
ggctccagcaccaacgcctgtcgccgctgtgactgcaacgagcactcacggcggtgccac
tttgacatggccgtgttcctggccacggggaacaccagtggggctgtgtgtgatgactgt
cagcacaacaccatgggccgccgctgccacctctgcaagcccttctactaccggcaccct
cgctctgacatccggtcccccactgcctgtgccccgtgtgactgtgacccagcaggctcg
ctggatggaggtgcctgcgatgggcacacggacgtggcgctgggcatgattgcggggcag
tgccgctgcaaggagaacgtggccggtccccgctgcgaccgctgccggcacggcgcctat
ggcctcagccatgatgacccacagggctgtcagccatgcaggtgtgacccacggggtacg
gtggcaggcagctccccatgtgaccccatcagtggggactgctactgcaaacgcttcgtg
gctgggcgctcctgcagccagtgtgtgcccgagttctggggtctgagctacgacttgggg
ggctgccggccctgcgcctgcgacttcggcggagcctacaacaaccggtgctccatggag
gacggggcatgtccctgccgtccccacatcatggggcggcagtgtgaccaggtacaaccc
ggcttcttctgtgcccccctcgactactacacctatgaggccgagcaggccaccggccat
ggccacagccaccctcagctcccgggtgccattcgggtggaggtgccccaggactgcctg
gagtatgacaccagggagccggcggggcggaagggacgctcacgccgtcagcgcagcccc
ctccgtgctccccagccccctgtccccccgcgccgcagccgccagcagccccccaagctg
gatgtggaggaggtggtgcgggacagtgccggccgcatggtgacgtggacaggcctgggg
ttcgcccgcgtgcgggacggggctggcctgaccttccgcgtggacaacgtgccctacccc
atggactacgagctgctgctgcgctatgagcccgagtcagccgaggactgggaggccgtg
gtcagcgtcagctcccaggtgctgcccaccagctctcgctgtgggaacctgctgccctcc
gagcagatgtaccgccagagtctgccccacagccagaggtacgtgctgctgtcccggccc
ttctgcttcgagcccagcaccccttatgaggtgaccatgcggcttcagcgggctggtgtc
acccagcgccaccctggtgccttcatcctcattgactcgctggtgctcctgccacgtgtg
tcggagttgccagggttccatggggcagaggcagcagcgcgccaggaggagctggagcgg
taccagtgcctggaggtgtttcgcatggccccccctcatcccctggctgaggcctgtgcc
cgcctggtctgcagcgtgtcagccctgatgcacggcggggcactgccctgccagtgcgac
ccacagggctcccgcagcagcgagtgccaggtgcaaggcgggcagtgtgagtgcaagccc
cacgtcactggccgacgctgtgaccactgtgccccaggcagcttcggctttgggcccctg
ggatgcagcccctgcacctgctcccccgagggctcggtgtcccagctgtgtgacaaggtg
agcgggcagtgccggtgccagcccggcaccgtgggccggcagtgtgaccagtgccagccc
ggccactggggcttccctgcctgccggccctgccagtgcaatgggcacgccgaggagtgc
gacccccgcacgggcacctgcctgcgctgccgcgaccacacgagcggacggcactgcgag
aggtgccaggacggttattatgggaaccctgtgctgggctcggggcagcagtgccggccc
tgcccctgccccggctaccctggcacacggaattaccacggcagcgcctgccacgcggac
gatgagacacaccacatcgtctgcctctgcgcccctggatacgcggggccccgctgtgac
cgctgctcccccggttacttcggggctccggagatggaggggggggagtgccggccctgc
cagtgcaacaacaacatcgacaccagcgacccagagggctgcgacccccgcacggggcag
tgcctgcgctgcctgtaccacaccgctgggccacgctgcgcccagtgtcagccgggctac
tacggcaatgccctgcagcgcagctgccggcgctgtggctgtgacccacggggtactctg
gcctcccactgcaccgatggcacctgcgattgtgaccgtggcacaggagcctgtgcctgc
cggcccaacgtcgtgggcaagagctgtgatcgctgcgcaccccacttctggaacctgggg
gggccaaggggctgcgagccctgtggctgccaccccatacacgccctgcaccctgcctgt
gacacagtgacaggacagtgccagtgccggcctggcttcgggggtcgtgtctgttcccag
tgccaggagcaccactggggagaccctgagcaggagtgccgagcctgtgagtgtgagccg
ctgggtgctgagagcccacagtgcgagcaggacaacgggcagtgccgctgccggctggga
ttcggggggctgcgctgtgaccgctgccaacggggctaccaggagccctttccccactgc
tcgccctgccacccttgctttgggcgctgggacctggccgtgggcagcctgcgggaaggg
ctgcagcgccttggggcacaggtgcaggcactgagggaggggagctctgcactcccactc
agcccccgtcgcctgcgggagctggaggaggctctggggcacgtggaacagctgctggga
gagagggacagctctcgtggtcccctcctcgatggactgcccaggcagctggatggcacc
aggatggaactggacaacttctggaagcacctccaagagttggagcaacatctcgaccag
ctggcgcaggcagatatgcagcaccatgaccggctagctgagctgagccgcgagctggga
gatctcaaccgaaccacctctcaccttcagatcctcctcggcactgtggcggcagctgga
ttcagcgagtcttaccgcagcatcctggcatcgacggaggcctcgcggcaggcggaggtg
gtggccaatggcacagctggcgagctcagtagggcgcagatgacgcagcgggcgactgag
cgggcactgcagcagcggggcgatactttccgccgtggcacggctgcagcccggaaatcc
ttgcgggagacacaaaaacgggtgatgggactcagcattgccaggatcaacgagaagatt
tgtggggcacccggagaccggagctgcaagcacgcatcttgcggaggagccttgtgccga
gacagcgcggggacgaggcactgcggtggcgttgggtgtgcaggggcactgcctatctca
gctcgagccctgagcagtgctcataatgcctcacagcagctggaggtggcattagggcag
ctgggtgttgtggcacagaagatgcaggaggtgcaggagctggcacggggggcacgcagc
agggcagaggaggcgctgggacgctctcaggctgcccgcagccgtgccgagaaggcaaca
gcccagctgcgggacttcatccgccgaatcaaggccttcctggcagaggagggagctgac
ccaggcagcattgagctggtggcccggcaggtgctgaacatctccctgcccagcagccct
ggacagatccaggagctgctgctggagatgcgggagagcatcagccagctggagggagtg
gacgcagttctcaacagcacggcggaggggctggctgtggcacgggatctgctggcacag
ggacaagaggccagggagcgagcagaaggcataagggatgagctggcggggacacagcag
gcactggaggtggcgcggacacaggcgatgacagcagggagtgccctgcagagggccagg
aatgccatccaggtggctgagaacagagccagagaggcggagcgcaggctgcaggtgctg
gacaggaaggagtcgcaggcgcagaggcggctgcgggagctggcacagcgcatcgccacc
ctgcaggagcacggccgggatgctcgccacatggcccagcaagccaaggatggggcacag
cgttccaccgccacctcggggacgcttagccaggacctggcccaggtaacacagcgttat
gtggtgctgaagaaccgggtgggcatgctggacagggtgtctggtggggccctgcagcgc
gtgtcacagctgatggcagaggtccaagacctcctggataaggccagcaacagcaaaagg
aagctggaagacctggagcagcgctttggggccaatgaacggacgatggcggcaaaggtg
acacgactgcaggctttggagcagcaggtcaccgggctgttgcaggagatccgggagagg
gctaacgcttacgccacctgctag
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integrated database retrieval system
