Pyrgilauda ruficollis (rufous-necked snowfinch): 121350768
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Entry
121350768 CDS
T07608
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03440
Homologous recombination
pruf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121350768 (TOP3A)
03460 Fanconi anemia pathway
121350768 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pruf03032
]
121350768 (TOP3A)
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121350768 (TOP3A)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121350768 (TOP3A)
DNA replication proteins [BR:
pruf03032
]
Eukaryotic type
DNA Topoisomerases
121350768 (TOP3A)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121350768 (TOP3A)
FA (Fanconi anemia) pathway
121350768 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
121350768
NCBI-ProteinID:
XP_041318343
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MNLSVRLFPGARMLPQPWRCFSRAAEDVALQRIRKVLCVAEKNDAARGIAELLSNRNMRR
REGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFIMPFRKWHSCNPLALFDAEIEK
YCPENYLDIKRTLEREIQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARFSE
ITPHAVRAACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQLIS
YGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLVLY
QMCMEDPVATVVDVVSKPKSKWRPLPLDTVELEKLASRKLKINAKETMTIAEKLYTKGFI
SYPRTETNIFPKELNLSALVEQQTQDPNWGGFAQRILDQGGPTPRSGTKSDQAHPPIHPT
KYASNLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANEQFIAQGLMILARNYLEV
YPYDKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTADQRFLPGQLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYLGEAAEVPEQDEVYPATPLSVRKCPQ
CNSDMVLKTRKNGGFYLSCMSYPACRTAVWFPDFVVDVTRDESICDVCKPHPVHRLKFKF
KKGSVPPVMPLEFVGCIGGCDEMLKELLDLKYSHRSSQPASSTTQPGHHLQANHSLNRAS
SETRQARGTSNMARGHLLPVNSSRTPRAAPAAVPDDGNAVVCNCGSEALLLTVRKDGPNK
GRQFYKCSSSTCNFFLWADEQPQDRGSSTLLQPAAGRTPAGFQQPGGGREPLGSSSSDAG
GGTVCRCEQPVVTRTVQKEGPNKGRQFHTCPKPREQQCGFFQWADENVAPGPSGDDSLNH
FGSNGFSRGLGSKAKRPGNLSSASTAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctccgtgcggctgttccccggggccaggatgctgccccagccctggcgctgc
ttctcgcgggccgcggaggacgtggcgctgcagaggatccgcaaggtgctctgcgtggcg
gagaagaacgatgctgcccgaggcatcgccgagctgctctccaacaggaacatgcggcgg
cgagaagggttttccaagttcaacaaaatctatgaatatgactaccagatgtttggccag
aacgttaccatggtgatgacatccgtgtcaggacatttactggctcatgattttatcatg
ccatttcgcaaatggcacagctgcaaccctttagctctttttgatgctgaaattgagaag
tattgccctgaaaattacttggatatcaagaggacccttgaacgagaaatccagcagtgc
caagccctggtgatctggactgactgcgatcgagaaggagagaacatcggctttgagatc
atccacgtgtgcaaagctgtgaagccaaacctgcaggttttccgagcgcgcttctccgag
atcacgcctcacgctgtcagagcggcctgtgagaacctcacccagcccgaccaaaaaacc
agcgatgccgtcgacgtcaggcaggagctggacctcaggataggtgctgccttcaccaga
ttccagactctgaggctgaggaagatcttccctgatattttagcagatcagctgatcagc
tatggcagctgccagttcccaacactgggatttgtagttgaacgcttcaaagccatccag
gcatttgttcctgaagccttctacaaaattaaagtgacccacgaccatgaggacggcagc
gtggtcttcaactggaagaggaaccggctcttcaatcacacagcctgcctggtcctttac
cagatgtgtatggaggatccagtagcgaccgttgttgatgttgtgagcaagccaaagagc
aaatggaggcccctgcccctggacactgtggaactggaaaaattggcttcccgcaaactg
aaaataaatgcaaaggaaacaatgacaatagcagaaaaactctacactaaagggttcatt
agttaccctcgaaccgagaccaacattttccccaaggagctgaacctctctgccttggta
gaacagcaaacacaggacccaaactggggagggtttgcacagaggattttggatcagggt
gggccaacccctcggagtggaaccaaatctgatcaggctcaccctcccattcaccccaca
aaatacgccagcaacctgcagggcaacgagcagagactctacgaattcatcgtgcgccac
ttcttggcttgctgctctcaagatgccaaaggacaggaaacaactgtggagattgacatt
gccaacgagcaattcattgcacaaggactcatgatcctggccagaaattacctggaagtg
tatccttatgacaagtggagtgataaggttatcccgctgtatcagaaagggtctcgcttt
cagcccaccacagtggagatggtggatggggaaaccagccctcccttgctcctcacagaa
gcagatctcattgctctcatggaaaaacacggcattgggactgatgccacccacgccgag
cacatcgagacgatcaagacgcggatgtacgtggggcttacggcagatcagcgcttcctg
cccggccagctgggcatggggctggtggaaggctatgattccatgggctacgagatgtcc
aagcctgaccttcgagctgagctggaggctgatctgaaattgatctgtgaggggaagaaa
gacaaatctgtagtgttacagcagcaggtccagaagtacaagcaagtcttcattgaagct
gtggccagagccaacaagttggaccaggccctggctcagtatctgggagaagctgcagaa
gttccagagcaggatgaggtgtacccagcaacgcccctttctgttcggaaatgtccccag
tgcaacagtgacatggtcctgaagaccaggaagaatggcgggttctacctcagctgcatg
agctatccagcctgtagaactgcagtctggttccctgatttcgtggtggatgtgaccagg
gacgagagcatctgtgatgtgtgtaaaccccatccagttcacagactgaagtttaaattc
aagaagggcagtgttccccctgtgatgcccctggagttcgttggctgcattggaggctgt
gatgagatgctgaaagagcttttggacctcaagtactcacacagatcatcccaacctgcc
tcatccaccacccagccagggcatcacctgcaggccaaccactccctgaacagagccagc
agcgagaccaggcaagccagggggacctcaaacatggcacggggacacctgctccctgtc
aactcctccaggacccccagggctgctcctgcagctgttccagacgatggcaatgccgtg
gtgtgcaactgtgggagcgaggcgctgctgctgaccgtgcgcaaggacggccccaacaag
ggccgccagttctacaagtgcagctccagcacctgcaacttcttcctctgggctgacgag
cagccacaggacagaggcagctccacgctgctccagcccgctgctggaagaaccccagcg
ggattccagcagccaggaggagggagagagcccttgggaagcagcagctcggatgctgga
gggggcacagtgtgcaggtgtgagcagcccgtggtgacgcgcaccgtgcagaaggagggg
cccaacaaggggaggcagttccacacctgccccaagccccgggagcagcagtgcggcttc
ttccagtgggcagatgagaacgtggcaccaggcccttctggagatgactctctgaaccat
tttggcagtaatggattctccagagggttgggaagcaaggccaagagaccaggcaatctc
tcctcagcatctactgccaagaagccacggacctgcagcatttgccaccagcctgggcac
acgaggaaaacctgtcctcagaaccactga
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