Pyrgilauda ruficollis (rufous-necked snowfinch): 121350771
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Entry
121350771 CDS
T07608
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf00260
Glycine, serine and threonine metabolism
pruf00630
Glyoxylate and dicarboxylate metabolism
pruf00670
One carbon pool by folate
pruf01100
Metabolic pathways
pruf01200
Carbon metabolism
pruf01230
Biosynthesis of amino acids
pruf01240
Biosynthesis of cofactors
pruf04981
Folate transport and metabolism
Module
pruf_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
121350771 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121350771 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121350771 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
121350771 (SHMT1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
121350771 (SHMT1)
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Paralog
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
121350771
NCBI-ProteinID:
XP_041318351
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All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MASSTQGLPSAELWASHNKMVMEPLDTNDPEVHSIIKKEKQRQRLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYRLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI
DYDKLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADDNGAYLMADMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALHQAMTPEFKAYQQQVVANCKALSSALMEMGYDIVTGGSDNHLILV
DLRSKGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFQQDDFRKV
AQYIHKGIELALRVQKDMSPKATLKEFKDKLEDPKYRGELKALKEEVEAFAAMFPLPGLP
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcaacacagggcctccccagcgccgagctctgggcctcccataacaagatg
gtgatggagccactggacaccaatgaccccgaggtgcacagcatcatcaagaaggagaag
cagcggcagaggctggggctggagttaattgcatcggagaactttgcaagccgagcagtc
ctggaggccctgggatcctgcatgaacaacaaatactctgagggctacccaggacagagg
tactacggtgggacagagttcgtggatgagctggaaaggctgtgccagaagcgagccctg
caggcttaccggctcgacccccagaagtggggagtcaatgtccagccctactcagggtca
ccggcaaactttgcggtgtacacggccctggtggagccccacggcaggatcatggggctg
gacctgcccgatggtggccacctcacccacggcttcatgacagacaagaagaagatctct
gccacctccgtcttcttcgagtccatgccctacaaggtcaaccccaagacgggttacatc
gactatgacaagctggaggagaatgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgccgacgacaac
ggggcctatctcatggccgacatggcacacatcagcgggctggtggccgccggcgtggtg
ccctcgcccttcgagcactgcgacatcgtctccaccaccacccacaaaaccctgcggggc
tgcagggccggcatgatcttctaccgcaaaggcacccgcagcgtggaccccaagacaggc
aaggagaccctctacaacctggagagcctcatcaaccaggcggtgttcccggggctgcag
ggaggcccacacaaccacgccattgcagggatcgccgtggcgctgcatcaggccatgaca
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcactctcatcagca
ctgatggagatgggctacgacatcgtcacagggggctctgacaaccacctgatcctggtg
gacctgcgcagcaaaggcacagacggcggccgggccgagcgggtgctggagctctgctcc
atcgcctgcaacaagaacacgtgccctggtgatgtcagtgccctgcggcccagcggcctc
cgcttcgggacgccggctctcacctcgcgcggcttccagcaggacgatttccgcaaggtg
gcccagtacatccacaaagggatcgagctggctctgcgtgtgcagaaggacatgagtccc
aaggccacgctgaaggaattcaaggacaaattggaggacccaaaataccgtggggagctg
aaggcactgaaggaagaggtagaagcctttgcagccatgttcccgctcccggggctgcct
gtcctgtaa
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