Pyrgilauda ruficollis (rufous-necked snowfinch): 121350807
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Entry
121350807 CDS
T07608
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pruf02000
]
121350807 (TMC5)
03037 Cilium and associated proteins [BR:
pruf03037
]
121350807 (TMC5)
Transporters [BR:
pruf02000
]
Other transporters
Pores ion channels [TC:
1
]
121350807 (TMC5)
Cilium and associated proteins [BR:
pruf03037
]
Other cilia and associated proteins
Stereociliary proteins
121350807 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121350807
NCBI-ProteinID:
XP_041318422
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MSYYNNEAFENPDYHFSETLEIDRRESSQRNPFSHQTPYDSSLYDYYGEHRGREQNYPVA
IPMASLGPGSDYSQDLPSTSPYGNFTDNLSFEPEPQLIYTPHSTSHMLDYPYTHGISSGS
EDSFIRRRNRRPPDEIFMTSSSMFETDPVCREEEDLVRSLASMSSNERIKAIQKMPETMR
KKREIRNKVLKEITKKSRHRGAQCTQCLQGAAVSFRRFGNTLSEYFHQLQPWHKTLKIIG
AEFGTSVLSYFVFLKWLLNLNIFSFLINFGFITIPQFLAAEPNNLSFTGLELFTGAGYFQ
RTVLYYGFYTNATISKVENGPSYNMQLAYIFTVGIYFVICFLILLFSMAKFFSRNFVNPQ
TFSVNASKLLCTWDFNIINEKAVKLQQKNLHTQIKEGLTEVNKEVLNFSVMERAVRIAFH
LLAWVASLGTAVAACTGVYFLAINNLELFMKGYSNDLQRQSAMLVLPVIVSLLNTLIPFF
FSWLGHLEKFQTPGQHIYVTITRNTILKMSIVGILCYYWLNIVATSESQCWETLVGQDIY
RLVLVDFIFCLLGSFFGEFLLRIIGTTVCMNLGLPEFDIGRNVLDLIYAQTLTWIGILFS
PLLPGIQMIAFFIVFFVKKVSLIRNCQPPGKVWRTAQMMTSFIFLLFCPSFLGVLSVIGV
TVWRLKPSEECGPFRGLSSMYAAVAEWIQILESYTASKWVVWIYHNLISSELFFFIISTF
VLIVTYLYWQIIQGRKTMTKLLRKQINNAGKDKMFLLKKLRTLQRAKRRSSALGGRGQQR
SSSLYHPSMQPAQEVPGYPERAFDRNQNTSYNEHPFSVEISSSSDFPPAAREPSPSPGPG
ASRAVALALRAREAALGEDSDGSGGFQP
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattataacaatgaagcctttgaaaatccagactaccacttctcagagacattg
gaaattgatagacgggagagttctcaaaggaatccattctctcaccaaactccttatgat
tcatctctgtatgattactatggagagcacagagggagggagcagaactaccctgtggcc
atcccaatggcttccctgggacctggctctgactacagccaggatttacccagcacaagt
ccatatggaaatttcacagacaatctttcctttgagcctgagccacaactgatttacacc
ccacattctacctcccatatgctggattatccctacactcatggaatttccagtggatca
gaagacagcttcattcggagacgcaaccgaagaccccccgatgagatcttcatgacttct
tccagcatgtttgaaacagatccagtgtgcagggaagaggaagatttagttagaagtctt
gcaagtatgtccagcaatgaaaggattaaagcaatccagaagatgccagagaccatgaga
aaaaagagagagatcagaaacaaagttcttaaagaaataacaaaaaaatcaaggcatcgt
ggtgctcagtgtacacagtgtctgcagggagcagcagtgtcatttcggcgatttggcaat
accctttcagaatactttcaccaactgcagccatggcacaagaccctgaagatcattggt
gctgagtttggaacaagtgttctttcttattttgttttcttgaagtggctgctaaatttg
aacatcttctcattcctcataaactttggtttcatcacaattcctcagtttcttgcagca
gaaccaaataacctttcattcacgggcctggagctgttcactggagctggttattttcaa
cgaacagtgctctactatggcttttacaccaacgctacaatcagtaaagtggagaatggt
ccatcttacaatatgcagttggcctatattttcactgttggaatatattttgtcatctgt
tttcttatcttgttgttcagcatggcaaaattcttctccaggaactttgttaaccctcag
acattctctgtgaatgccagcaagctgctctgcacttgggacttcaatataattaatgaa
aaagctgtgaagctgcaacaaaagaatcttcacacacaaataaaggaaggtctcactgaa
gtaaacaaagaagttctaaatttttctgtgatggagagagctgttcgtattgcttttcat
cttcttgcttgggttgcttccctgggaacagcagtagctgcctgtactggtgtttacttc
ctcgccattaataacctcgagctgtttatgaaagggtatagcaatgatctacagagacaa
tctgccatgttggtgctacctgtgattgtatctctcctcaacacattgatcccgttcttc
ttttcctggcttgggcacctggagaagtttcagactcctggacagcacatatatgtcact
attaccagaaataccatcctgaaaatgtcaattgttggaatattgtgctactactggctt
aacatcgtggctacctcggagtcacagtgctgggaaactttggttggccaagatatttat
cgtcttgttctagttgacttcatattttgtttgcttggctctttctttggagagttttta
ctaagaattattggaactacagtctgcatgaacctggggctgccagaatttgatatcgga
cgaaatgttttagatttgatctatgcacagactttgacctggattggtatcctgttctca
cctctgttgcctggtatccagatgatagcattttttatagtattttttgtgaaaaaggtc
agtctgataaggaattgccagccccctggcaaagtctggagaactgctcaaatgatgaca
tccttcattttcctgctgttttgtccttccttccttggagtcctgtctgtcattggagtc
actgtctggaggttaaaaccttcagaggaatgtggtcctttcagaggtttgtcttccatg
tatgctgcagttgctgagtggatacaaatactggaaagttacactgcctcgaaatgggta
gtgtggatctaccacaatttaatttcaagtgaacttttcttcttcatcatctcaactttt
gtactaattgttacttacctttactggcaaataatacaaggaagaaagaccatgaccaaa
ctcttacgtaagcaaattaataatgcaggaaaagataagatgtttctactcaaaaagcta
cgaacactgcaaagggcaaagagaagatcatctgcactgggaggaagaggccagcagaga
agctcctctttataccacccatccatgcaacctgcccaggaggtgccaggctacccagaa
agggcatttgacagaaaccaaaacacgtcctacaatgagcatcccttttctgttgagatc
tcaagcagcagtgactttccaccagcagcccgggagcccagccccagccccggccccggc
gcctcccgggccgtggcgctcgccctgcgcgcccgggaagcggcgctgggggaggacagc
gatggcagcggaggattccagccctga
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