Pyrgilauda ruficollis (rufous-necked snowfinch): 121351096
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Entry
121351096 CDS
T07608
Symbol
CACNB1
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04010
MAPK signaling pathway
pruf04260
Cardiac muscle contraction
pruf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121351096 (CACNB1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121351096 (CACNB1)
04261 Adrenergic signaling in cardiomyocytes
121351096 (CACNB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121351096 (CACNB1)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121351096 (CACNB1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
DUF6374
Motif
Other DBs
NCBI-GeneID:
121351096
NCBI-ProteinID:
XP_041318898
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVREGGMARTPSSSTQDIQMDVLDNAALQGSEGLEFGLGSLSGGDTGWLSPLPAAQGSAE
SYTSRPSDSDVSLEEDREALRREAERQAMAQLEKAKTKPVAFAVRTNVGYNPSAADEVPV
QGMAICFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENMRLLQEQKMRQSRL
SSSKSGDNSGSSLDVVTGTRRPTPPASGGLDMPSFAFDPDELEEEEEAVEAQRSPKSSVS
SVTTPPAHSKRIPFFRKTEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHR
FDGRVPYSPVPCPVSPVPHSPVLCPLSPAEVQSETERIFELARTLQLVALDADTINHPAQ
LAKTSLAPIIVYIKITSPKVLQRLVKSRGKSQAKHLNVQMVASDKLAQCPPEMFDIVLDE
NQLEEACEHLAEYLEAYWKATHPPSSNPPNPLLNRTMATAALAASPAPVSNLQVQVLTSL
RRNLNLWGREATPSPPGALEEHAL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggaaggcggcatggcgcggaccccctcgagctccacgcaggacatccagatg
gacgtcttggacaacgccgccctccagggatcagaggggctggaatttgggctgggctcg
ctgtcaggaggggacacgggctggctgagccccctccccgctgcgcagggctcggccgag
tcctacaccagccgcccctcggactcggatgtgtcgctggaggaggaccgggaggcgctg
cgcagggaggccgagcgccaggccatggctcagctggagaaagccaagaccaagccggtg
gcgttcgccgttcgcaccaacgtgggctacaacccctcggccgccgacgaggtgcccgtg
cagggcatggccatctgcttcgagcccaaggacttcctgcacatcaaggagaagtacaac
aacgactggtggatcgggcggctggtgaaggagggctgcgaggtgggcttcatccccagc
cccgtcaagctggagaacatgcggctgctgcaggagcagaagatgcggcagagccgcctg
agctccagcaaatcgggtgacaactccggctccagcctggatgtggtgacagggacgcgg
cggcccacgccccccgccagcggtggcctggacatgcctagctttgcctttgaccccgat
gagttagaggaggaggaggaggccgtggaggcgcagcgctcccctaagagtagcgtgagc
agcgtcaccaccccccccgcccacagcaagcgcatccccttctttaggaagaccgagcac
gtgcccccgtacgacgtggtgccctccatgcgccccatcatcctcgtggggccctccctg
aagggctacgaggtgacggacatgatgcagaaggcgctgttcgacttcctgaagcatcgc
ttcgatggccgtgtcccttactcccctgtcccctgtcccgtgtcccctgtccctcactcc
cctgtcctctgtcccctgtccccagccgaggtgcagagtgagaccgagcggattttcgag
ctggcccgcacgctgcagttggtggccctggacgccgacaccatcaaccacccggcccag
ctggccaagacctcgctggcccccatcatcgtctacatcaaaatcacctcccccaaggtg
ctgcagcggctggtgaagtccagggggaagtcccaggccaagcacctcaacgtgcagatg
gtggcctcggacaagctggcacagtgcccacctgagatgttcgacatcgtgctggacgag
aaccagctggaggaggcctgcgagcacctggccgagtacctggaggcttactggaaagcc
acgcacccgcccagcagcaaccccccgaacccgctgctgaaccgcaccatggccacggcc
gcgctggccgccagccccgcgcccgtctccaacctccaggtacaggtgctcacctccctg
cgcaggaacctcaacctctggggccgagaggccacccccagcccccccggagccctggag
gagcacgcgctgtga
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