Pyrgilauda ruficollis (rufous-necked snowfinch): 121351108
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Entry
121351108 CDS
T07608
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121351108 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pruf04054
]
121351108 (DHX58)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121351108 (DHX58)
Pattern recognition receptors [BR:
pruf04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
121351108 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
AAA_11
AAA_22
cobW
PSD4
Helicase_C_2
TTRAP
AlaDh_PNT_C
DUF5740
NmrA
Motif
Other DBs
NCBI-GeneID:
121351108
NCBI-ProteinID:
XP_041318918
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MELRGYQREAAAPALRGRNSIVWLPTGAGKTRVAVHVCRRHLESRRGAKVAVLVNKVHLV
DQHTEKEFHALQDTFRVTSISGDTSHKTFFADLVKKSDVVICTAQILQNALVSTEEDLHV
ELTDFSLLVIDECHHTHKDAVYNKIMLRYLQRKLSGEQDLPQVLGLTASPGTGGATSFEG
AVEHILQICASLDTEKITSVQDELQHLQSHVPQPKKQYDLCQERVQDPFGEQLKKVMVQI
QQFMEKADFPQDFGTQIYEQRIVELEKTATEMFCRKTRVCALHLRKYNDALLINDTVRMV
DAFQCLEQFYSTERDMKDPTEQFLTATFEENRASLQALAGDHRYENPRLAKLEGILREHF
QPLGTSRGIVFTKTRQSAHSLLSWLQTTATLRGQHIRAAVLTGTGYSNQTRHMTQNEQQD
VIKQFRQGSLNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMMQARGRARAENSVYSVL
AKANTREVTRELLNEDLVELMKSAIQAVQAMPEQEYFQKIQELQRVAVASWLMKEARISE
RRQLHDPAAVRLYCINCNRAVCQGSDIRTVEGMHHVNINPKFGSYYRVSSGKIQFPRTFK
DWEPGCRISCKDCSQDWGMEMLYRQVKLPILCIKNFVVETPAEKRRYKKWGAVTFPIKAF
DYLEYCSATYSLSF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgggggtaccagcgggaggcggcggccccggccctgcgcggccgcaacagc
atcgtgtggctgcccacgggcgccggcaagacccgcgtggccgtccacgtctgccggcga
cacctggagagccggcggggcgccaaggtggccgtgcttgtcaacaaggtgcacctggtg
gatcagcacaccgagaaggagttccacgcgctgcaggacaccttcagggtgacgtccatc
agtggggacaccagccacaaaaccttctttgccgacctggtgaagaagagcgacgttgtc
atctgcacagcgcagattctgcagaacgccctggtcagcacggaggaggacttgcacgtg
gagctgacagatttctcactgctggtgatagacgagtgccaccacacgcacaaggacgcc
gtctacaacaagatcatgctgagatacctccagcgcaagctcagtggggagcaggacctg
ccacaggtcctggggctgacggcatcccctggcactggaggggcaacatcctttgaggga
gctgtggaacacatcctgcagatctgtgccagcctggacactgagaagatcacatcagtg
caggatgagttgcagcacctgcagagccacgtcccccaacccaagaagcagtatgacctg
tgccaggagagagtgcaggacccctttggtgagcagctgaagaaggtgatggtgcagatc
cagcagttcatggagaaggcggatttcccgcaggacttcggcacgcagatttacgagcag
cgcattgtggagctggagaagacagctacagagatgttttgtcgcaagacgcgggtgtgc
gccctgcacctgcgcaagtacaacgacgccttgctgatcaacgacaccgtgaggatggtc
gacgccttccagtgcctcgagcagttctacagcaccgagagggatatgaaggaccccact
gaacagttcctcactgccacgtttgaggagaacagggcgagcctgcaggcacttgctggg
gatcaccgctatgagaaccccaggctggccaagctggaggggatcctgcgtgagcacttt
cagcccctgggcacttctcgtggcatcgtcttcaccaagacaaggcagagtgcccacagc
ctgctcagctggctgcagaccacggccacgctccgtgggcagcacatcagggctgccgtc
ctcaccggcaccggctacagcaaccagaccaggcacatgacacagaatgagcagcaggat
gtgatcaagcagttccgccagggatccctcaacctgctcttctccaccagtgtggccgag
gagggcctggacatccccgagtgcaacatcgtggtccgctatgggctgatgaccaacgag
attgccatgatgcaggcccggggccgtgcccgtgctgagaacagtgtctactctgtcctt
gccaaagccaacaccagggaggtgacccgagagctgctcaatgaggacctggtggagctc
atgaagagcgcaattcaggccgtgcaagccatgcctgagcaggagtacttccaaaagatc
caggagctgcagcgggtggccgtggccagctggctgatgaaggaggccaggatcagcgag
cggcggcagctgcacgacccggccgccgttcgcctgtactgcatcaactgcaacagggcc
gtgtgccagggcagcgacatccgcacggtggagggcatgcaccacgtcaacatcaacccc
aaattcgggtcatattacagagtttcctctgggaaaatacagttcccgaggactttcaag
gactgggagcccggctgccgcatttcctgcaaagactgcagccaggactgggggatggag
atgctgtaccggcaggtgaagctgcctatcctctgcatcaaaaactttgtggtggagaca
ccagcagagaagaggaggtacaagaagtggggtgctgtgacattccccatcaaggcgttt
gactacctggagtactgctctgccacctacagcctgtccttctag
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