Pyrgilauda ruficollis (rufous-necked snowfinch): 121351422
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Entry
121351422 CDS
T07608
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121351422 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121351422 (EXOSC10)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
121351422 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
121351422
NCBI-ProteinID:
XP_041319492
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MAAAAREGSPEGQAGSSGTPANTEGTSTMSALPGFDSPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYCSFPGFRAYCSTQSDRLLRCMSQVMQYHGCRSLMKDSSKVTGLEDKFDMLV
DSNDVILERVSILLDEAAGVNRNQQPVLPAGLQPPQMIVSSWNRKAGEFHKRAQSETFRL
LHAKNISRPQLKFREKIDNSNTPFVPKLFIKPNALKPLPEALTKSGRQRKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDEVLKKPELQMYRPIEETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRSFLGFTCLMQISTRTEDFIIDALELRSDMNILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCNVDA
DKKYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKVRELLWERGKEQPTQLQVVWQRSRD
ICLKKYIKPLFTDESYLELYRRQKKHLDTQQLAAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKIAEELPKESQGIIACCNPVPPLVRQQINELHLLVQQAREMPLLKSEITSAVRKRAP
LPNPEKLENALFGPHDSSRIPMEDFQNNSALDPALVLEDVCLFSDSERTMDIQDSQPEST
CLVATTTVSIFSECDENEGNKKTLTTAQRKAQLIMESFENPFKMYLPPEENSAYVSQSAK
FDPSSKIYEISNRWKLMSQAPVQKSKNETNKKAAQQSAAHVQTQKVHKKAAENVVSIRQQ
ATQEQANRKKERDTSEMGAETGAELPTQEKKRQKKTQQPEELEALRQFTPFDYSNSSFKV
FAGGSKSKQSPQFDPAKQAYTGKKFAGANKLQQSGNRSMSYLMGKAERSSTHHWPKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgcccgtgaggggagcccggaggggcaggcgggcagctccgggacgccc
gcgaacaccgagggaactagcacgatgtcggccttgcccgggttcgacagccccgatgcc
ttcgtcaagtacgctctcggcacagtggtggctgcaacaaaggcatccaacgggctcccc
cagcctggtgatgagtacgatttctactgcagcttcccagggttccgtgcctactgcagc
acgcagagcgaccgcctgctccgctgcatgagccaggtgatgcagtaccacggctgccgg
agcctcatgaaggattccagcaaagtgacagggctggaagataaatttgacatgctggtt
gactccaatgatgtcattcttgaaagagtgagtattttactggatgaagccgcaggagtg
aatagaaaccagcagccagtcctgccagctgggttacagcccccacagatgattgtttcc
agctggaaccgtaaggcaggagaattccacaaaagagctcagtctgaaacattccgactg
cttcatgccaagaatatttctcgaccacagcttaagtttcgtgaaaagattgacaattcc
aacactccctttgtacctaaactttttatcaaaccaaatgctttgaagcctttgcctgaa
gccctcacaaaaagtggacggcagagaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcagcagaggacgcagaaaactgagcaagacatgtttgct
cacccttaccagtatgaactggagcatttttctccaccagatgaagttctcaagaaacct
gaactccagatgtacaggcccattgaggaaacaccctgtcattttatcaccacactggat
gagttggtagaactaaatgaaaagcttatgacttgtaaagaatttgccttggacttagag
caccactcctacaggagcttcctcggcttcacatgtctgatgcagatttccacccgaaca
gaagacttcattattgatgcattggaactgcgcagtgacatgaacatcctcaatgagacg
ttcacagaccctgcaattgtgaaggtccttcatggtgctgattcagatgtggaatggctg
caaagagacttcggtctgtacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaatcttggcagacattctttggatcacttgctaaagctgtattgcaatgtagatgct
gacaagaagtaccagctggctgactggagaatacgccctttgccagaagaaatgatccag
tatgcccgtgatgacactcactacttgctctacatctatgataaagtgagggagctgctg
tgggagagagggaaggagcagcccacacagctgcaggttgtgtggcagcgcagcagggac
atctgcctgaagaaatacatcaagcccctctttacagatgagtcctaccttgaactctac
aggaggcagaaaaaacaccttgatacccaacagctggcagcatttaggctgctgtttgca
tggagagacaagatagcacgtcaagaggacgagagcacagggtatgtgctaccaaatcat
atgctgttgaagatcgcagaggagctacccaaagaatcccagggtatcattgcttgctgt
aaccctgtcccaccgcttgttcgccagcagattaatgaattgcatctgctcgttcagcag
gcccgagagatgcctctcctcaagtcagagattacttcagcagtcaggaagagagcacct
ctacccaaccctgagaagctggagaatgccctctttggaccacatgacagttcacggatt
cctatggaggattttcagaataactctgccttggatcctgcactggttttggaagatgtt
tgtctcttttcagacagtgagaggacaatggatattcaagatagtcagccagagtcaaca
tgtcttgttgctactaccactgtcagcatattcagtgaatgtgatgaaaatgaaggaaat
aagaagactttaaccactgcacagcggaaagctcagctaataatggagtcctttgaaaat
ccatttaaaatgtatctacctccagaggagaattctgcctatgtctcacaatctgcaaag
tttgacccatcatcaaaaatttatgaaatcagcaatcgatggaagttgatgagtcaggca
ccagtgcagaagtccaagaatgaaaccaataagaaagcagcccagcagtcagctgcccat
gtccagacacaaaaggtgcataaaaaggcagcagaaaacgttgtatctattcgtcagcaa
gccacgcaggaacaagctaataggaagaaggagagagacacaagtgaaatgggagcagaa
acaggagcagagttgccaacgcaagaaaagaaacggcagaagaaaacccagcaaccggag
gagctggaagctctaaggcagtttaccccctttgattacagcaattccagcttcaaagtg
tttgcaggaggcagcaaatcaaaacagtcaccacaatttgatcctgccaagcaagcttac
acaggcaagaaatttgctggagctaacaaacttcaacagtctggaaaccggagcatgtcc
tacctgatggggaaagctgaaaggagttcgacacaccactggccaaagagataa
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