Pyrgilauda ruficollis (rufous-necked snowfinch): 121351767
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Entry
121351767 CDS
T07608
Symbol
LOXHD1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pruf03037
]
121351767 (LOXHD1)
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121351767 (LOXHD1)
Cilium and associated proteins [BR:
pruf03037
]
Other cilia and associated proteins
Stereociliary proteins
121351767 (LOXHD1)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
Other domain-containing proteins
Others
121351767 (LOXHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLAT
ATS3
Motif
Other DBs
NCBI-GeneID:
121351767
NCBI-ProteinID:
XP_041320063
LinkDB
All DBs
Position
Unknown
AA seq
2083 aa
AA seq
DB search
MNRPHLRFYFPCNNWLSKEDGDGLYVRDLIGSLNPMDVPKINKYVVRVFTGEVSGSGTDA
DVFINIFGEKGDTGVRKLDNDKDNFEKGAEDKFTLDAPNLGKLRKINIGHNNKGGSAGWF
LAKVIIEDIGNKCVYQFPVGRWFALDEDDGKIQRDILVGGTEATGIVYNVAVVTGDIRGA
GTNSKIHVILHGSKGLKNSGKIFLEGGEFERARTDLFNVEIAALLSPLSRVTIGHDNCGV
SSGWFCEKVVVYCPFTGIEQTFPCGKWLDEDEGDGLIERELYEMVSLRQKRLKKNPWSLW
IWTSDIKNAGTDATIFFQIYGDKGKSDEMKLDNNSDNFETGQTDKFMIELPDLGNFYKLR
IWHEKRNPFAGWHLNKVTLLKTLTKEKYSFNCGRWLDINEEDNEIVRELPAEGSLVTEVM
PVIKYRVTVCTGTVSGSGTDANVFVCLIGDQGDTGERVLYNCINTVNKFEKGNADEFFIE
AVTLKQVRRVRIGHDGKGGSSGWYLAKVIVREEGQPESEAVEFPCYRWLDKNEDDGQIVR
ELVPAGESPLLKNVSYHISVKTGDIPGASSDSRVFIKLYGEKADSSKEPLLVSDNDLGNY
FERGRVDEFTLDMMDIGKINRILIGHDNVGLRSGWFLASVQITVPVQGRQYMFPCNRWLD
KDEADGRVEVEVYPSEILPIEKLINYEVSVVTGDVRAAGTNAKVFMQIYGETGKTELIIL
ENRSNNFERGATDIFKREAADVGKIYKIRIGHDGTGIGDGWFLESVTLKRLASKTKGSDK
NNKKKKKSDEEEEEETKEEEGMDVYTFVAHRWLAKDEGDKELVVELVPDGESDLEENTYE
VHVLTGIVWGAGTDANVFLSIYGMERGDTGERQLKRSNNLNKFEKGQVDVFTIKAIDLGE
LKKLRIRHDNSGASPSWFLERVEIIDLKESITYYFPCQRWLAVEEDDGQIARELVPVDEA
FVKKDSENDGQSPATLGLEQKAKSTTYTVKVKTGDKKNAGTDANVFITLYGSKDDTGIVS
LKASKINKNKFERGKVDEFTVESVDIGDLKKIKIGHDNKGNSTGWFLEWVEIDAPSLGQC
LKFPCGRWLDKSEDDGAVERIIFPADLQTIEYIPFVPYEITVYTSDIFGAGTDADVFIVL
YGSDGICTQQKSLCLNKREQRMYFERNSVNQFIVELEDVGDIIEKIRIGHKGGGLNSGWH
LDRVTIRRLLPNGKGSETVTFPCERWLAKSEDDGETVRELVPSDIFTEKLLKDGTLKQIE
EEVEEPLEVHTYKISVFTGDIYGAGTDANVFLNIYGDMGDMGERKLSKSETNFNKFERGQ
EDTFTIQAVDLGILYKIKIRHDNSMFSPDWFLEKVEILDETTEESFVFLCERWLSKKKED
KKIERTLYEQSYDGERNSLDGSSLSVSSQDSSAHLKEPKKSSLVKAAEEGSLIPYHITVT
TGTEYDSSTDSRVFIIIMGPQKVQTERLWLDLPEGKDEFADGSVEKFSVWGLDVGEIKKV
EVGHDGATPESCWLMEELTIIVPTKGAMYNFVCKCWLARDKGDGLTSRILNILDAECINI
GIKILYEVTVVTGDIESGGTDANIFMTVFGSNGNTEEMLLDKNGDRFERGQEDSFIMEIA
DIAPLRKMRIRTDGKGTRPHWFMERITLRNLTNQEVATFTYGDWLSKLRNATGSLVCEMP
AVINDEQMMEDTTYTLQVKTSDIGGAGTDANVSLILFGEYGDSGTLPLKESNKSNKFERN
QMDEFSFSEMLSLGDLCKVRIWHDNKGIAPGWHLEYIDVMDSAMDKTFRFQCDRWLAKGE
DDGQLIRELACANNDILELKERTAYEIVTVTSDREDADTKENIWIILEGKMGRSKEFLME
NSSKKRRFERGATDTFQFSSKNVGDIAAICVGHCPKDGKKSSAKADVFWHVQEIIVTEME
LCNKYFFRCNAKIPLRYKRRDYKVFECAKVTESFASKARSLVPVKYETIVVTGFEKGAGT
DANVFITIYGLNGDSGRRALKQKFRNLFERGKTNRFYLETLDMGELKKVRIEHDNSGLAP
GWLVERVEITNSATGVTTIFPCGKWLDENRGDGLICRDLFPRY
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacctcacctccggttttacttcccctgcaacaactggctgagcaaggaggat
ggggatgggctgtatgtcagagacctcattggcagcctgaatcccatggatgtgcccaaa
atcaacaaatacgtggtccgggttttcaccggtgaagtcagcggcagcggaacagatgcg
gatgtcttcattaatatcttcggtgagaaaggagacacaggtgtgaggaaactggacaat
gacaaagacaattttgaaaaaggagcagaagacaagttcacgctggatgctccgaatctg
ggaaaactgagaaaaattaatattgggcacaataacaagggaggctctgctggctggttc
cttgcaaaggtgatcattgaggacataggcaacaaatgtgtgtaccaattcccagttggg
cgctggtttgctttggatgaagatgacgggaaaatacagagggacattcttgttgggggc
actgaagccacaggcattgtgtacaacgtggccgtagtgaccggagatatcagaggagcc
ggcaccaactccaagatccacgtgatcctccacggctccaaaggcttgaagaacagtggg
aagattttcttggaaggaggtgaatttgagcgtgccaggacggatctcttcaacgtggag
atagctgcccttctcagccctctcagcagagtcaccattgggcacgataactgcggtgtc
agctctggctggttttgtgagaaggtggtggtttactgcccattcactgggattgagcaa
accttcccatgtgggaagtggctggatgaagatgaaggggacggtctcatcgagagggag
ctctacgaaatggtttccctgcgccagaaacggctgaaaaaaaacccctggtctctgtgg
atctggacaagtgacattaaaaatgcaggaacagatgccaccatcttcttccagatttat
ggcgacaaagggaagtcagatgagatgaagctagataacaattcagacaactttgaaact
ggacagactgacaaattcatgatagagcttcctgaccttgggaacttttacaagcttcgg
atatggcatgagaaaagaaatccctttgctggctggcatctgaataaggtaactctgctg
aaaacgctgacaaaagaaaaatactcattcaactgcggccgctggctagatataaatgaa
gaggacaatgagatcgtgcgggagctccccgccgagggatctctggtgactgaagtcatg
ccagtgatcaagtaccgcgtgacggtgtgcacgggcacggtgagtggcagcggcacagat
gccaatgtcttcgtctgcctcatcggggaccagggggacacgggcgagcgcgtcctctac
aactgcatcaacaccgtcaataagtttgaaaaaggcaacgctgatgaattcttcattgaa
gcagtaacgctgaagcaggtgaggagggtgaggatagggcatgatggcaaaggaggaagc
agtggctggtaccttgccaaagtgatagtgagggaagaaggacagccagaaagtgaggct
gtggaattcccctgctacagatggcttgacaaaaatgaggacgatggtcagattgtccga
gaattagtgcctgctggggagtcaccattgctaaaaaatgtcagttatcacatcagcgtg
aagacaggagatatccccggtgccagctcagattccagggttttcatcaaactctacggt
gaaaaagcagactccagcaaagagcctctcttagtgtctgataacgatctaggcaattat
tttgaacgtggtcgagtggatgagtttactctagatatgatggatattggaaagatcaac
cgaattctgattgggcacgataacgtgggtctgcggtccggctggttcctggccagtgtc
cagatcacagttccagtccagggaaggcagtacatgttcccctgcaaccgatggcttgac
aaggatgaggctgatggcagggtggaggtggaggtctacccaagtgagattttgcctatt
gagaaattgataaactatgaggtgtctgtagttactggagacgtgcgagccgcaggcacc
aacgccaaagtcttcatgcagatttatggtgagactggcaaaacggaattgatcatccta
gaaaacagatccaacaactttgaaaggggagccacagatatcttcaagagagaagctgca
gatgttggcaagatttataagattcggataggccacgacgggacaggcattggggatggc
tggttcctggaaagcgtcacgctgaagcgcctggcctcaaaaacaaaggggtctgataaa
aataataagaagaaaaagaagtctgatgaggaggaagaggaggagaccaaggaggaagaa
ggaatggatgtctatacgtttgtggcacatcgctggctggctaaggacgaaggggataag
gagcttgtggtggagctggtgcctgatggagaatctgacctggaggaaaatacgtatgaa
gtccacgtcctcactgggattgtgtggggggctgggacagatgctaatgtcttcctgagc
atctatggcatggaaagaggagacacgggtgagcgccagctgaaaaggtcaaataacctc
aacaagtttgagaaaggacaggtagacgtgttcaccatcaaagccattgacctgggcgag
ctgaagaagctgcggatccgccacgacaactctggtgctagccccagctggttcctggag
agggtggagattattgacctcaaagagagcatcacgtattactttccatgccagcggtgg
ttggcagtcgaggaagatgacggtcagattgccagggagctggtcccagtggatgaagca
tttgtaaagaaagattcggaaaatgatggccagtctcctgcaactttgggcctggaacag
aaagctaaatccacgacatacacagtgaaagtgaaaacgggggacaagaagaatgctggg
acagatgccaacgttttcatcacactctacggaagtaaagacgatacagggatagtcagc
ctaaaggcctcaaagattaacaagaacaaatttgagcgtgggaaggtagatgagtttaca
gtggagtctgtggacattggagacctgaaaaaaatcaagataggccatgacaataaaggt
aattcaactggctggtttctggaatgggtggagattgatgccccatccctgggacagtgc
ctcaagtttccctgtggccgctggctggataaatcggaggatgacggagccgttgagaga
attatcttccctgcagatctgcagacaatagagtacatcccatttgttccttacgagatc
acagtgtacaccagtgatatttttggagctggcacggatgcagatgtcttcattgttctt
tatggaagtgatgggatttgcactcagcaaaaatccctgtgcctcaacaagagagagcaa
aggatgtattttgaaaggaattcagtgaatcagttcatcgtggagctggaggacgttggt
gacatcattgaaaagatccgcataggacacaagggcggagggctgaactcggggtggcac
ttggaccgtgtgacgatccggaggctgctgccaaacgggaagggctcagaaactgtcaca
tttccatgtgaaagatggcttgcaaagtcagaagatgatggggagactgtcagagaactg
gtgccatctgatatttttactgaaaagctcctgaaggacgggacactcaagcagatagag
gaagaagttgaagagcctttagaagttcacacatacaagatcagcgtgttcactggggat
atctacggtgctgggacagatgctaatgtcttcctaaatatctatggagacatgggggac
atgggagagagaaaactcagcaaatccgaaacaaacttcaacaagtttgaaagaggacag
gaggacacgttcacgatacaggctgtggaccttggcattttatacaagatcaagattcgc
catgacaatagcatgttcagtcctgactggtttctggaaaaagtggagatcctggatgaa
accacagaggagtccttcgttttcctgtgtgagcgctggctctctaaaaagaaagaggac
aaaaagatagagcggacactttatgaacagagctacgatggcgagcggaacagcctggat
ggctcctctctcagcgtgtccagccaggacagcagtgcccacctgaaggagcccaaaaaa
tccagcttggtcaaggcagcagaggaaggctcactgatcccgtaccacatcaccgtcacg
acaggcaccgagtacgactccagcaccgacagccgcgtgttcatcatcatcatgggcccg
cagaaggtgcagaccgagaggctgtggctggatctcccagaaggaaaggatgaatttgca
gatggctctgtggagaaattctcagtctggggcctagatgttggggagatcaaaaaagtg
gaggtggggcacgacggcgctacccctgagagctgctggctgatggaagagctcaccatc
atcgtgcccaccaaaggtgccatgtacaactttgtctgcaagtgctggctggccagagac
aaaggtgacgggctcacttcacgaatcctcaacatcctggatgcagagtgcattaacatt
ggcatcaagatcctctacgaagtcacggttgtgactggagacatcgaaagcggcggtact
gatgccaatattttcatgactgtcttcggatccaatgggaacacagaggagatgctgctg
gataaaaatggagacaggtttgagcggggccaggaggacagtttcattatggagattgct
gacatcgcacccctcaggaagatgaggatccggacggacgggaaggggacgcgcccacac
tggttcatggaaaggatcactctgaggaacctgactaaccaagaagtggccacatttacc
tatggggattggctgtccaagctgagaaatgccacgggaagcctggtgtgtgagatgcca
gctgtcataaacgacgagcagatgatggaggacaccacatacactcttcaggttaaaacc
agtgacatcggaggagcaggcaccgacgccaacgtgtccttgatcctgtttggggagtac
ggggacagtggcaccctgcctctgaaggagtccaacaagtctaacaagtttgagaggaac
cagatggatgaattcagcttctctgaaatgctgagcctgggagacctctgcaaagtgcgg
atctggcatgacaacaaaggaattgccccaggctggcacttggaatatattgacgtgatg
gactctgctatggacaagacatttcgtttccagtgtgatcgctggctggctaaaggggag
gacgatgggcagctcatcagggagctggcctgtgccaacaacgacatcctggaactgaag
gaacggactgcctatgagattgtcacagtaaccagtgacagagaggatgcagacacgaag
gaaaacatctggatcatcctggaagggaagatgggccgctcaaaggaattcctcatggaa
aactcttccaagaaaaggagatttgaaaggggagcaactgacacattccagttttcttca
aagaatgttggtgatattgcagccatctgtgttggtcactgcccaaaagatgggaagaag
tcatctgcaaaagctgatgtcttctggcacgtccaggagattattgtgacagagatggag
ctttgcaacaagtacttcttcaggtgcaacgcgaaaatccctctgcgctacaagcggcgg
gactacaaagtcttcgagtgtgccaaggtcaccgagagcttcgccagcaaggcccggagc
ttggtgccagtcaaatacgagaccatcgtggtgacaggcttcgagaagggcgcgggcacc
gacgccaacgtgttcatcaccatctacggcctgaacggggactcggggaggcgcgcgctg
aagcagaagttcaggaacctcttcgagcgaggcaaaaccaacaggttttacctggaaacg
ctggacatgggggagctgaagaaggtgcggattgagcacgacaacagcgggctggctccg
ggctggctggtggagcgggtggagatcaccaactcggccactggtgtcaccaccatattt
ccctgtgggaagtggctggatgagaacaggggggatgggttaatctgtagggaccttttt
cctaggtactga
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integrated database retrieval system
