Pyrgilauda ruficollis (rufous-necked snowfinch): 121351967
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Entry
121351967 CDS
T07608
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121351967 (TRPA1)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121351967 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121351967
NCBI-ProteinID:
XP_041320398
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MKRSLLRLCRSRQKAAASSAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSYEVLNVMDSSGNTPLHWATKKNQVESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKVLVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCLEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHSSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKVKDGEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTDLYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNSSTEKNNSFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctctgccgctcccggcagaaggcggccgcctccagcgcc
taccagggcgtcgtgtgcgaggccgatgccgcctccgtcgcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgtaggctacggagcttcattaagaagaatcgttctggg
cttacaaaagtggatgaattaaatgccaccccactgcatcacgctgcagaaggaggacaa
atagaactcatgcagttgatcatagatgattcttcctatgaagtattaaatgtgatggat
tcttctggaaataccccactgcactgggccacaaagaaaaaccaggttgaaagcgttcgc
ttgcttctcagcagaggagccaatccaaacattctcaactccaatatgatggcacctttg
cacatggctgttcagtccctgcacaatgaaattgtgaaggttttagtccaacatagcagt
acagatgttaacttggaaggtgaagcagggaacacacccataattgtagcgtgttacaag
gacaatcctgaagcactgacactcctgattgaaaatggaggaaaaatatgtaaaccaaat
aaaacgggatgtatgcctatccatgcagcggcattttcaggtgcaaaaacgtgtctggaa
attcttttgaaaaaaggtgaagaattgggtcactctgctaaaacccacatcaattttacc
aataatggaaagtgcagtccacttcatttggccgttcagagtggagaccttgaaatgatt
aaaatgtgcattgaatttggagctcaaattgatctaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcaacagagattgtaaagctaatgatgtcatcctat
gctggggaggaatccattattgatgctgtagatgggaataaggaaacattgcttcacaga
acagcactgtttgatcattatgaactggcggagtatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccgcttctgctggctacttcctgtgcatcatgg
aaaattgtgaatttactgctttcaaaaggagcaaatgtgtcattaaaagatcatctgggt
cggaatttcttgcatttgactgtattgcagcctggaggattacagcatctgaatgagaaa
tatctgcagatggaacatattaaaaatcttgtagtggatgaagataatgaaggatgcact
ccgttgcattacgcatgcagacaaggtgtggccctctcagtaaataatttactcagcctc
aacgtttccatctactctaagagcagggacaagaagtcgccattacactttgctgccagc
tatgggcgcatcaatacttgtcaacgacttataagagacatgaaagacacaaggcttttg
aatgaaggtgataagaagggaatgactccccttcatttggcagcccagaatggtcatgag
aaggtagttcaatttcttctgaagagaggggctctcttcctctgtgattataaaggctgg
acagccctgcaccatgctgcctttggaggatacactcgcacaatgcagataattttggat
actaatgtgaagtgtactgacagagtggatgaagaagggaacacagctttgcacttggcc
gcacgagaaggacatgcaaaagcagtgaggttacttcttgactatggggcaaaaattctg
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaataggagaaaagacgtg
gtgtctgctgtcattttgcacaaaagatgggaagaagctgttgtgactttctctcactct
tccagtgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaa
ctggtgttggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttctat
attgaatacaacttcagatatcttcagtgtcccttgacacttaacaagaaagtaaaggat
ggtgaagatattttctatgaaccacttaccactttaaatgccatggtgcgccacaatcgt
atggagctcctcagtcatcccgtgtgtaaagaatatttgcttatgaagtggatggcctat
gggtttcgagcacatttaatgaatttaggcatatattctcttggtctcatcccactgact
cttctggtcactcacatacaaccaggaagacctttgaatggaacagacctctatgaagca
agaccattagaatatgaggattcatacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggcatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ttgttggattactccaatctactggactggaccatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tacttgtcttggatgaacttcttgctttatcttcaacggtttgagaactatggaatctat
gttgtgatgttctgggaaattttgaggactttgattcggattgctgtggttttctttttc
ctgatactggcctttgggctgagtttctttgtccttttgggttcacagcaaacatacagc
acacctctgctttccgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattccttgatcctttactaagcagtgaattgccatatccattcctgagttacaca
gttctcattatatttaccttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggtgatattgctgaagtacaaaaatatgctgcactcaaaaggattgcaatgcag
gttaatcttcataccaacttagagaagaagctgccattttggttcttaagtcgggtggac
caggaatcaatcactgtatatcccaacaggccgagatactgtggatttatgagtgtgttc
cagtattgctttgggtgtgaggactctaccacatatgcacagagccctgatacaacacta
gaattggaagttctgaagcagaaatacaggctcaaagatatatcaacattgttggaaaag
caacatgacctcattaaactgattatccaaaagatggagatagtatcagaggctgaggat
gaagacagcaatgatttatttcagcacaaatttaggaagaggcagttagagcacaagaat
agtaaatgggatacagtgttaaaagctgttaaaacaaatgtgcctaactcaagcacagaa
aagaacaatagcttcttctag
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