Pyrgilauda ruficollis (rufous-necked snowfinch): 121351999
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Entry
121351999 CDS
T07608
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121351999 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121351999 (RAD54B)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121351999 (RAD54B)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
121351999
NCBI-ProteinID:
XP_041320455
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All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MRRSAAPSQVLGNAGKKPRFIPPGKCTAVCLKNETKEMDQEIKLKEIVEKEGGASLLSKI
NIQNQNENCTQSVESTGKVKTKACFSIDKCSKAEKKTLNVPKTDALYLPTSGTAKEEAAQ
EAPDCLVKYFSVVWCKASKKKHKKWEGDAILITKGKSVILKDMEGKDIGRGTGYKAKELD
SLDEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTHDTDTTALSQTNTKPFCKPFKN
VCQPSTKENMLRESQNCKPRHDPNATNSLVMPRPNSSHQWMFNKAGLPVVDVVVDPYIAS
NLRPHQKEGILFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPV
LKRALVVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFMGSPLYSVMIISYEMLL
RSLDQIQAVEFNLLICDEGHRLKNSAIKTTTALTSLSCERRIILTGTPIQNDLQEFYALI
EFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGEKRAAELTRLTGLFILRRTQEV
INKFLPPKKESIIFCRPTALQLELYRKLLSSRVITSCLQGRLENSPHLICIGALKKLCNH
PCLLFKAIKEKSCDPMSEEYDESSLYEGVIDVFPQDYTSDTFCETDSGKLQVLVKLLAAI
HELNSSERVVLVSNYTQTLNILQDICKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFSPAF
IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHAVHIYRLLTTGSI
EEKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHEDSSCVTHDLLECDCRGK
VDHQNTSSEKPPLSRSCQLEQNHGKPNSKKPLSMSQLMQWKHFPGQHQTLADPFLERIKE
NVSFIFQNVTNPTSPPNKS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatctgcagctccaagtcaagtcctaggaaatgctggcaaaaagccaaggttt
ataccaccaggaaaatgtactgctgtttgtctcaagaatgaaactaaggagatggaccaa
gaaattaagttaaaggagatagttgagaaagagggaggtgcttcattgctatctaaaata
aatatccagaatcaaaatgaaaattgtacacagtctgtggagtcaactggaaaagtaaag
acaaaagcgtgtttcagcattgacaagtgtagcaaggcagaaaagaaaacgctaaatgtg
cccaaaactgatgcactgtatttgccaacatcagggactgcaaaggaagaagcagctcag
gaagcgcctgactgtcttgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaa
aagcacaagaagtgggaaggcgatgctattctcattacaaaaggaaagtcagtaatattg
aaagatatggaaggcaaagacattggcagaggtactggatataaagctaaagagctagac
agccttgatgaaggtcaaacactgatggttggtggaaaagaaattgaagtgatgggtgta
atttcagcagatgatttcagcagtggcaggtgttttcaggctggaatagggactcatgac
acagatacaactgcattatctcaaactaatacaaaaccattctgtaaaccattcaaaaat
gtctgccaacccagtactaaagagaatatgctcagggaatctcagaactgcaaacctcgc
catgatccaaatgctacaaattctctggttatgccacgaccaaattcaagtcatcagtgg
atgttcaataaggctggtttacctgtggtggatgtagttgtagatccttacattgcaagt
aatctccgcccacatcagaaagaaggaattctatttctgtatgaatgtgtaatgggaatg
agagttagtggcagatttggagctattctggcagatgagatgggcttaggaaaaaccctg
cagtgcattgcacttgtctggactctcctgcgtcaagggccctatggatgcaaacctgta
ctcaagcgagcactggtagtcacccctgggagtctggtgaaaaactggaaaaaagaattt
cagaaatggctgggaagcgaaaggatcaaagtctttacagttgatcaggaccacaaagta
gaagaatttatgggttctccactttattctgttatgataatcagttatgagatgctgttg
cgatctttggatcaaattcaggctgtggaatttaacctcctaatctgtgatgaaggacat
cgtctgaaaaatagcgctattaagacaactacagcccttactagtctgtcttgtgagagg
agaattatccttactggtactccgatccaaaatgacttgcaagaattttatgcattaata
gagtttgtgaatccaggaatactcggttctttatccacgtatagaaagatatatgaggaa
ccaattgtcagatctagagaaccttcagcaacagaggaggaaaaggaattgggagaaaaa
agagcagcagaactcacacgcctcactggactctttattctaagaagaacacaggaggtt
ataaacaaatttctgccccccaaaaaggagagcataatcttctgccgaccaacagcgctg
cagcttgaattgtatcgaaaactgcttagttctcgtgttattacatcgtgtctgcaaggc
aggctggaaaatagtccccacctaatatgtataggagctctgaaaaaactttgcaatcat
ccatgtcttctgtttaaagctataaaggaaaaaagctgtgatcctatgtctgaggaatat
gatgagtctagcctctatgaaggtgtaatagatgtcttcccacaagattatacttcagac
actttctgtgaaactgattcaggaaaattgcaggtgctggtgaagttgttggcagcaatc
catgagctcaactcttctgaaagagtcgtgttggtatccaattacactcagacattaaat
atattacaagacatatgcaaacattatggatactcctatactagacttgatggccatact
cctgtctcacagagacaacatattgtggatactttcaatagcaaattcagcccagctttc
atctttttgctgagttcaaaggctggtggagtgggactgaacctggttggagcatctcat
ttgatcctgtatgatattgactggaatccagctacagatattcaggcaatggctagagtg
tggagagatggtcagaaacatgctgtccatatctacaggctgctaaccacaggttcaata
gaagaaaagatttatcaaagacagatcagcaaacaagacctttctggggcagttgtagac
ctttccaagacatctgagcacacacatttttctattgaggagcttaaaaatctctttact
ctacatgaagattccagctgtgttactcatgacttgcttgagtgcgactgtaggggaaag
gttgaccatcaaaatacttcctcagaaaagcctcccctatctagaagctgccagcttgaa
caaaaccatgggaagcctaattcaaagaagccactttccatgtcacagctgatgcaatgg
aagcatttccctgggcaacatcagactcttgccgaccctttccttgaaaggataaaagag
aatgtttctttcattttccagaatgtaaccaatcctacttccccacctaataaatcttga
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