Pyrgilauda ruficollis (rufous-necked snowfinch): 121352210
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Entry
121352210 CDS
T07608
Symbol
NES
Name
(RefSeq) nestin isoform X1
KO
K07609
nestin
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pruf04812
]
121352210 (NES)
Cytoskeleton proteins [BR:
pruf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
121352210 (NES)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
YlqD
Motif
Other DBs
NCBI-GeneID:
121352210
NCBI-ProteinID:
XP_041320903
LinkDB
All DBs
Position
Unknown
AA seq
1867 aa
AA seq
DB search
MLSTESFAGARALGEESLQMWDLNKRLEAYLARVKFLEEENEVLRAEIQSTKSSPAGDSW
RAKYEEELRALRDALDLAFREKCTAELARDNLYEEVQQVRSRCQKEQAAREEAKKQLSLS
RKELEEERRAQIWLKERAVQLEKEVEALLEVHEEEKAGLDQEIASFSHSLESFRCAPVAF
QPVEVEDYSKRLSEIWKGAVETYKAEVAQLEGSLCQAKENLWKAVEDNQQSQLQLQHLEK
ELAGLKARKEMLEESLARQWQEQRREAEKFQLALEALEQEQQSLRVQIARVLEDRQQLMH
LKMSLSLEVATYRTLLEAESTRLQMPAGEFRLANGVRDVKLEVSSSKAVAASPEARRLLP
REPRASPLPRAELKKPQSDTLTPQSARELQKITSALHGSATGRAGGLGAPAPSPPQAGRA
DPPLSPEPPSPSPPQRESSGGDGPAWPGGDEAAMSLGMECPLSRASGDIGSASLQPLGAA
HRLQYPAQLVSEVLEDALKAMEGDAQLKEEPTPSSTWDICAPSPVFPPEVCGEAVPERPG
EQREPSEGSEDGESSEAEQRAGEGMLQGLAGESSVLQDTAPSPQGTAAPLSASGSREELG
AWEEEEEEEEVPAVLSPRHPEMEAQEGDKDLSGQTESSWEKPEEERAESPSTEPSHPSED
EEEEEKGDFQEEGTGVQEEECPHREVEAARGVLVENHLVLPTKGHLGEDFADAEQERSEQ
QEMPVCEMDLAAEKGREQELCPEQEPSSAHEAIPAEEAPTGAEEDTVGQEATGRVEDAEG
EKGEASREVLGGEDRGVGQDPMAGEHLTAGEDHGAGEDHGAGEDHGVGEDHETGEDHGAG
EDHGVGEDHETGEDHGAGEDHGAGEGSQVGEDPGSGEAVAPGDSLEGDSRAPEEPEDLQE
SEGEEQEELEPGEEPWGQEGGGSGQEPCPEDWEVTAGDTEGVLGPEEAAWADDTPSSAAR
LESEERGGTQPAELEEAQEDDEEDAKSQEMSQQQALPEAEPAAERARQEQLGSVAEPEAA
PPGAPGQGDSQELEEDPEEPREVQDEDTAEGLSLELGQLESSELALGQVPGDSSEWALQE
TPKNPEPTELESSELVALEHVPGDRDKWALEETPRDPEPTELESSELALGQAPGDSSEWA
LEETPKNPEPTEVGELESSELALGQVPGDSSEWALEETPKNPELGELESSELALEHVPVD
RDEWALEETPKNPEPTEVGELESSELALGQVPGDSSEWALEETPKNPEATELEGSELALE
QVPSDSSEWALEDTPGDPEPTVGTGRRVELEDTLPDSTPLHLYQGGTPNPPESEETTEPA
PGCDTAHEGGGWQEGRDKPPTPSVPESPEEEAGAEGAEEEEGAEGAEEEEGYFMVSAPNQ
EVSSSEEAEIPEDFEEIKVDATEDSQDDLGAPGEASPVPEGKEHLEVLAAEADEDMEMPT
EEPEVPKDEESTAELEEGPGEDPSCLGVMGPSAAGSGEEGPGEDPSCLRVVGPSSGGSDE
EGPEDPSCPGVVGPSSGGSGEEGPEDPSCPGVVGPSAAGSDGPAQGATGTAAWQGAEHSE
DLAAEPDEELPNTTELERGASGARTLPGCTLGLAGQEEEDEDEPSTALHDTAKATAELQA
QAVPGEAEQPLQEQPPTEEEEALGSESLPPPRNEQPSGASPPQLGSAPGQGGSPEVIPAI
PDTAALPAEVSVDVMKDSGILEIVEQALEFNQELMGGRLAEGGQGPGRAELSRDAGEDSS
LASSSEEEPTVQEVPEMEMEGVLRAENGLHREASLEELAEFTEEMLNGTSSTALAQELPT
EPSGVMPAQTPTPGDGTATKLGDGTLRGKQLSPVPPALGEDVLCLTAQQAAACGLRAEQE
PWSSGDE
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcaccgagagtttcgcgggggcgagagccctgggagaggaatcgctgcagatg
tgggacctcaacaagcggctggaggcgtacctggcccgcgtgaagttcctggaggaggag
aacgaggtgctacgagccgaaatccagagcaccaagagcagcccggccggggactcgtgg
cgggcgaagtacgaggaggagctgcgagccctgcgggatgcgctggatctcgccttcagg
gagaagtgtacggccgagctggccagggataacctctacgaggaggtccagcaggtgaga
agcaggtgccagaaggagcaggcagcccgagaagaagctaagaagcagctgtccttgagc
aggaaggagctggaggaggagaggagagcgcagatctggctgaaggagagggctgtgcag
ctggagaaggaggtggaagccttgctggaggtgcacgaggaggagaaagcagggctggac
caggagatcgccagtttctcccacagcctggagagtttccgctgtgccccggtggctttc
cagccggtggaggtggaggattactccaagagactctcggagatctggaaaggggcggtg
gagacctacaaggcagaggtggcgcagctggagggttccctgtgccaggccaaggagaac
ctgtggaaggcggtggaggacaaccagcagagccagctgcagctgcagcacctggagaag
gagctggcggggctcaaagcacgcaaggagatgctggaggaaagcctggcccggcagtgg
caggagcagcgcagggaggcagaaaagttccagctggcgctggaggccctggagcaggag
cagcagagcctgcgggtgcagatcgcccgggtgctggaggacaggcagcagctcatgcac
ctcaagatgtccctcagcctggaggtggcaacctacaggacgctgctggaagcagagagc
acccgcctgcagatgcccgcaggggaattcaggttggccaacggggtgcgagatgtcaaa
ctggaggtgagcagcagcaaagcggtggcagcgagccccgaggccaggcggctgctgccc
cgagagccccgcgccagccccttgccccgggcagagctcaaaaaaccccaaagcgacacc
ctgaccccccaaagcgccagggagctccagaaaatcacctcagctctccatggaagtgct
accggtagggctggggggctgggagcccccgcacccagccccccccaggcgggcagagcc
gaccctccgctctccccggagccccccagcccctccccgccgcagcgggagagctctggg
ggagacggtcccgcctggccgggaggagatgaggcagcgatgagcctcgggatggagtgt
cccctgtccagagcctcgggggacattggcagtgccagcctgcagcccctgggagccgcc
cacaggctgcagtacccggcccagctggtcagcgaggtgctggaggatgccctcaaggcg
atggaaggcgatgctcagctcaaagaggagcccacacccagctccacgtgggatatctgt
gcccccagccccgttttccccccagaggtttgtggagaggctgtgccagagcggcctggg
gagcagcgagagccctcggagggctctgaggatggagagagctccgaggcagagcagagg
gctggggaggggatgctccaggggctggctggggagagcagcgtcctgcaggacacagcc
ccttccccacagggcacggctgctcccctgagcgcctcggggagccgggaagagctggga
gcgtgggaggaggaggaggaagaggaggaggtacctgctgtgctgagcccgaggcatcca
gaaatggaggcccaggagggggacaaggatctctctggacagacagagagcagctgggaa
aagccagaggaggagagggcagagagcccgagcacagagccatcacacccctcagaggat
gaggaggaggaggagaagggggatttccaggaagaaggaacaggtgtgcaagaagaggag
tgcccacacagagaagtggaagctgctcgtggtgtccttgtggaaaaccacctggtgttg
cccacaaaaggtcacctgggagaggactttgctgatgcagagcaggaaaggtctgagcag
caggaaatgcccgtgtgtgagatggatctggctgcagagaagggaagggaacaggagctg
tgtccagaacaggagccctcgagtgcccatgaggccatccctgcagaggaggctcccaca
ggagctgaagaagacactgtgggacaggaggccacaggcagagtggaagatgctgaggga
gaaaagggagaggccagcagggaggtgctgggaggagaggatcgtggggtgggacaggat
cccatggcaggagagcacctcacagcaggagaagaccatggggcaggagaagaccatggg
gcaggagaagaccatggggtaggagaagatcatgagacaggagaagaccatggggcagga
gaagatcatggggtaggagaagatcatgagacaggagaagaccatggggcaggagaagac
catggggcaggagaaggttcccaggtaggagaggaccctgggtcaggagaggctgtggca
ccaggtgacagcctggagggggacagcagagccccagaggagcctgaggacctgcaggaa
agtgagggggaggaacaggaggagctggagccaggagaggagccctggggacaggagggt
ggtggcagtggccaagagccctgtccagaagactgggaggtgacagcaggggacactgag
ggagtgttggggccagaagaggcagcctgggcagatgacaccccgagcagtgcagcaagg
ctggaaagcgaggagagaggtggcacacagccagcagagctggaggaggcccaggaagat
gatgaagaagatgccaagagccaggagatgagccagcagcaggcactgccagaggctgag
ccagcagctgagcgggcacggcaggagcagctgggcagcgtggcagagcctgaggcagcc
cctccaggtgcccctgggcaaggggacagccaggagctggaggaggatccagaggagcca
cgggaggtgcaggatgaggacactgctgaggggctcagcctggagctggggcagctggag
agctcagagctggcactggggcaggtgccaggtgacagcagcgagtgggcattgcaggag
acccccaaaaacccagagcccacagagctggagagctcagagctggtggcactggagcat
gtgccaggtgacagggacaagtgggcactggaggagacccccagagacccagagcccaca
gagctggagagctcagaactggcactggggcaggcgccaggtgacagcagtgagtgggca
ttggaggagacccccaaaaacccagagcccacagaggtgggggagctggagagctcagag
ctggcactggggcaggtgccaggtgacagcagtgagtgggcactggaggagacccccaaa
aacccagagctgggggagctggagagctcagagctggcattggagcatgtgccagttgac
agggatgagtgggcattggaggagacccccaaaaacccagagcccacagaggtgggggag
ctggagagctcagagctggcactggggcaggtgccaggtgacagcagcgagtgggcattg
gaggaaacccccaaaaatcccgaggccacagagctggagggctcagagctggcactggag
caggtgccaagtgacagcagtgagtgggcattggaggacacccccggagacccagagccc
acggtgggcaccggcaggagggtggagctggaggacacactgccagacagcacacccctg
cacctctaccaaggagggaccccaaaccctccagagagcgaggagaccacggagccagcg
cctgggtgtgacacagcccacgagggtggagggtggcaggaagggagggacaagccacca
acccccagcgtgccagagagccctgaagaagaggcaggggcagagggggctgaggaggag
gaaggagcagagggggctgaggaggaggaaggttatttcatggtctctgctcccaaccaa
gaggtgtccagctcagaggaagctgagatccctgaggactttgaagaaattaaagttgac
gcaactgaagacagccaagatgatctgggggctcctggagaagcatctccagtgccagag
ggcaaagagcacctcgaggtgcttgctgcagaagcagatgaggatatggagatgcccact
gaagaacctgaggtgccaaaggatgaggagagcactgctgagctggaggaaggcccagga
gaagatcccagctgtctcggggtgatgggaccatcagctgcaggttctggtgaggaaggc
ccaggagaagatcccagctgtctcagggtggtgggaccatcatcaggaggttctgatgag
gaaggcccagaagatcccagctgtcccggggtggtgggaccatcatcaggaggttctggt
gaggaaggcccagaagatcccagctgtcccggggtggtgggaccatcagctgcaggttct
gatgggccagcccagggtgccacgggcactgcagcgtggcagggagcagagcactcagaa
gatctggctgctgaaccagatgaggagctccccaacacaaccgagctggagaggggagcc
agtggagcaagaaccctcccaggctgcactctggggttggcagggcaggaggaggaagat
gaggatgagcccagcacagctctccatgacacggccaaggccacagcagagctccaggcc
caggcagtgcctggtgaggcagagcagcctctgcaagagcagccacccacggaggaggag
gaggcactgggcagtgagagccttcctccacccaggaatgaacagccctccggggccagc
ccacctcagctgggctctgcaccggggcagggaggttctccagaggtgattccagccatc
cctgacactgctgctctccctgcagaggtgtcagtggatgtcatgaaagactcggggatt
ttggaaatagttgagcaggccttggagttcaaccaggagctgatgggggggaggctggca
gagggtgggcagggtcctggcagggccgagctctcccgggatgcaggggaagactcctcc
cttgcctcatccagcgaggaggagccaacggtgcaggaggtaccagagatggagatggag
ggagtgctccgagctgagaacgggctgcacagggaggccagcctggaagagctggctgaa
ttcaccgaggagatgctgaacggcaccagcagcacagccctggcacaggagctgcccaca
gagccctcgggggtgatgccagcacagacccccacccctggagatggcaccgccaccaaa
ctgggggatggcaccctgaggggcaagcagctcagccccgtgccccctgctctgggggag
gatgtgctgtgcctcacagcccagcaggcagcagcctgtgggctgagggctgagcaggag
ccctggtcctcaggggacgagtga
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integrated database retrieval system
