Pyrgilauda ruficollis (rufous-necked snowfinch): 121352213
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Entry
121352213 CDS
T07608
Symbol
BCAN
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121352213 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121352213 (BCAN)
04091 Lectins [BR:
pruf04091
]
121352213 (BCAN)
Proteoglycans [BR:
pruf00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
121352213 (BCAN)
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
121352213 (BCAN)
Lectins [BR:
pruf04091
]
C-Type lectins
Lecticans
121352213 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
hEGF
ig
ArAE_1_C
Ig_3
Izumo-Ig
EGF_2
Motif
Other DBs
NCBI-GeneID:
121352213
NCBI-ProteinID:
XP_041320907
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MAPALPLLLLLWLFVPTVLSEVFGPGDGTEDPKALQVSIPRHPALEAVLAGDITIPCLIT
YLGPQPTAGTGGRRAVLGTPRVKWTFISEGREVEILVARGDRVKVSEDYRLRASLPIFHQ
RYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILHVKVKGVVFHYREGSMRYAYTFAEA
QEACARIGASIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIQTPREACYGDMNGFPGVR
NYGVVDPEDMYDVYCYAEDLPGEIFLETAPDRFTLEEAAQRCRALGAELASPGQLYAAWN
AGLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFLFRNQTGFPDAQSRYDAYCFRE
VTNSFPEAAGKYQGQEPEENLLQEIVTVAEKLEELQLPRAHVELESRGAIYAVPFFEDPD
LGKPSQSPEDTLGPGARHPPLVTSVSSEEEQGAAPGGGPGSASAESPGGGRHPGQPTEPE
GPTGAPAGDTEPPEGFPRPPSPAAPAERPDRPRDALGRPAHPASPGPPGHRMTSPTGAAS
ATSTESREAAGSPRRGHKSGGASTPFSAAEDAELSGDVVESPGASPLPAAPSQPQEEGEE
QSGAVWIPSPAAPGERSTVPAVTPWHAELPGSSSAPAPAGEEAAPPPPGTDRGMPAAASE
EEEEEEEERPAPSVATVEGFLAAVPGEAGGCVPNPCLNGGTCVEDGAQLTCLCLPGYGGS
SCERPLRRCSPGWDSFQGACYRHFSTRRSWEDAESQCRHYGGHLATILTPEEQDFINDQY
REYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWHDGGQWSDVP
CNYHLSYTCKMGLGKLCHPKEGHRHGWETSPARGTLSLSGLGGFAAMYRPPLQCSAGPPP
PSATPSPLAKRSSATRSAPPPAIAAGPASPRAARPSSAAGRMAHGSHPSWPAVLVWLSPP
RSEGAPGLAGSTAPSPALVWMGTALGPRCAE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggccccagccctcccgctgctgctgctgctctggctgtttgtccccacagtgctctca
gaggtgtttggccctggagatggcacagaggaccccaaggctctgcaggtgtccatccct
cggcacccagccctcgaggccgtgctggcaggcgacatcaccatcccctgcctcatcacc
taccttggcccccagcccaccgccggcacgggcggccgccgcgccgtcctggggacaccc
cgggtcaagtggaccttcatctctgagggcagggaggtggagatcctggtagctcgcggg
gacagggtgaaggtgagcgaggactatcggctgcgcgcctccctgcccatcttccaccag
cgctacaccaacgcctccctgctgctcaccgagctgcgccccaacgactcgggcatctac
cgctgcgacgtgcagcacggcatcgaggacggccatgacatcctccacgtcaaagtcaaa
ggggtggtgttccactaccgggagggctccatgcgctacgcctacacctttgccgaggcg
caggaagcctgtgccaggatcggtgccagcatcgccacccccgagcagctctacgccgcc
tacctggggggctacgagcagtgcgacgccggctggatcgccgaccagaccgtcaggtac
cccatccagaccccccgtgaggcctgttacggagacatgaacggcttccccggggtgagg
aactatggagtggtggacccggaggacatgtatgatgtgtactgctacgctgaggacctc
ccaggggagatctttttggagacggccccggacaggttcacgctggaggaggcggcgcag
cgctgccgggcgctgggcgcggagctggcgagcccggggcagctgtacgcagcctggaac
gcggggctggacgcctgcagccccggctggctggccgacggcagcgtccgctaccccatc
gtcaccccccgggagcgctgcggcggggctctgcccggcgtcaaaaccatcttcctcttc
cgcaaccagacgggattccccgatgcccagagcagatacgatgcctactgcttccgagaa
gtgacaaactctttccctgaggctgcaggaaaataccaaggccaagagcccgaggagaat
ctcctccaggagattgtcacagtggcagaaaagctggaggagctgcagctgccccgagcg
cacgtggagctcgagtcgcgaggggcgatttacgccgtccctttctttgaggaccctgac
ctgggcaagccgagccagtcccctgaagacaccctggggccaggggcccggcaccccccc
ctagttacctccgtgtcctcagaggaggagcagggagcagcgccgggcgggggccctggc
agcgcatcggcggagagcccgggcggagggcgacacccgggccagcccacggagccagag
ggacccaccggtgccccagcaggtgacacggagcctcccgagggctttcctcgtccgccc
agccccgccgcccccgcagagcgcccggaccgtccgcgggacgccttggggcggccggcc
caccctgccagccctgggccacccgggcacagaatgacatcgccaaccggtgccgcttct
gccacctcgacagagagccgagaagccgctggaagcccccgccgcgggcacaagtccggc
ggggcgagcacccccttttctgccgcggaggacgccgagctctccggagacgtggtggaa
agccctggggcatccccgctgcctgccgcgccctcgcagccgcaggaggagggagaggag
cagtcgggagccgtgtggatcccctcgcccgcggccccgggggagcggagcactgtcccc
gcagtgacaccgtggcacgcagagctgcccggcagcagcagcgcaccggccccggcagga
gaggaggctgcaccgccgccgccgggcacagaccgagggatgcctgctgcggcttccgag
gaagaggaggaggaggaggaagagcgacctgctccctccgttgccaccgtggagggtttc
cttgcagccgttccgggagaagcaggtggctgtgtccccaacccctgcctgaacggaggg
acctgcgtggaggacggcgcccagctcacctgcctgtgcctgcctggctacggaggcagc
agctgtgagagacccctgcggaggtgcagccccggctgggacagtttccagggcgcctgc
tacaggcacttctccacccggaggagctgggaggatgcagagagccagtgcaggcactac
ggggggcacctggccaccatcctgacccccgaggagcaggacttcatcaatgaccagtac
agggagtaccagtggatcggcctgaacgaccgcaccatcgagggggatttccagtggtct
gacgggagccccttgctctacgagaactggcaccccgggcagcccgacagctacttcctc
tcgggggagaactgcgtggtcatcgtgtggcacgatgggggccagtggagcgacgtgccc
tgcaactaccacctctcctacacctgcaagatggggctgggtaagctgtgccaccccaaa
gaggggcatcgccacggctgggaaacgagtcctgcccgcggcaccctcagtctgtcgggg
ctgggggggtttgctgcaatgtaccgaccccccctgcagtgcagtgcgggcccccccccg
ccctcagcaacgccctcgcctttggcaaagcgaagcagcgctacgagatcggctccaccg
cccgctatcgctgccggcccggcctcgccccgcgccgctcgcccgtcatccgctgccggg
aggatggcacatgggagccaccccagctggcctgccgtcctggtctggctcagccccccg
aggagtgagggagcgcctgggctggcaggcagcaccgccccaagccccgcgctggtgtgg
atggggacggcactgggacctcggtgtgcggagtga
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