Pyrgilauda ruficollis (rufous-necked snowfinch): 121352249
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Entry
121352249 CDS
T07608
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121352249 (TP53BP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
DUF4537
BRCT
Tudor_3
RTT107_BRCT_5
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
121352249
NCBI-ProteinID:
XP_041320972
LinkDB
All DBs
Position
Unknown
AA seq
1939 aa
AA seq
DB search
MAAAGSAAGLGDGRAGGLGPGRAPQPVASRTERGGSSQLDPGFSQQDTPLLIVEDSQPQG
AEADAERAWLGVLARRLPARRSPSPVLDIGRGPAGSRAPRERLAGKGGARGDGGSAYRGR
ADGAVLAEPMESPARPSASGPRDCAAEESPAPDRESSALGKAGERSEGDVEDCASSPCVE
DTGMSQLQFGVLELSQSQDLESDLVPSEGDARHQLHSGPTVLSSRLVKNESKYEFCADNT
ETDSITEAHTALETQAKKSERSKTVSCTFRTLQEAEEHTRKETHVSGASKTEESLGSGHE
ESDILSTQEEMFPENPATATAGSGCPITRMEEGSSLACTPARSLQVLQLSGQAFLVQEGD
STVSSGLAIPPPVSFGPNALVPSSPTERGRAEDEQMDISMPADGRELMQKRRGDMLVEMA
FPCVPPRPLVQPQASTPVSQSAPTFFPGSLAIPSQPEFSHDIFVPTQSPENRHAEEKTAG
LTPLCLPGDLSGSTDALSKMSTGDSVSQPPDSCKLMLSASGCSQPTNTDISSGSLNTGQD
SETTQVERISECKASDSRRCSVENDKIKLKVNAGDLAPSENCEKAKKEDVETAGMPVGQF
VSAGVAGDGPLASAVHQEIECISGSQAAADQSGLPEIFSYAQETSRPEAVPETQCEEQEE
KLQIKEDRSLVNITLSHKFILEREGQCHEDTEVNDSCKNSKNVAQELEEVGPECQGKEAL
KDCTFDAGEAKSMDKLSTNMAKLNEVLAKPSVGEVPEQRDLLLNLKSDVQSEVALCAKNH
PDCSELGQVVISNQPSLQERGFETHGVQHENPVLQNMEDTVTTRNLEQEEQMQPQEKATS
KSPSPSSGTPFHFTLPKEGDVIQSLSSITPPLTGHLKMGPRRHSTPIVDDTCPDSTIATS
DVTAEGTMGTNNVTVESAVVSADVSEVYEKGESGVVPESDAKLSLRMNLVTPVNDGSEES
LPFSLEKPATSDRKDGSSAAASSQKASSVFSRVCEVRREDEARGHGLSTSPFRGDQLIFP
GPKEDAELHTNPSDWQYQPQKADGSGGQSLIPQRIQQDCHQQSSDAEDGESMETDVVSTQ
AEDGKRMQKKQSKAVQIDQSQERWENIKNKGIQTTADCLFTPTTTVTTATQTSEEICRQV
ETGTSMSGQKPGQQDVNIQTDESGEKLVNTSGDDTDSLRSQGEEEFNLLYPPKGRVQRRH
MRTIREVRTVVTRVITDVYYINGAEVERKVVEETEEPVVECQECETDMSPSRTAGGSSLT
SGDLGDVSSFSSKASSLHRTSSGGSSGHSATHSSSSSGRGTGAVKGKVCGTETGEFALPI
GRGILGKLSPRKGAGQPASSLRVSQTGALPCEEEEDCMPGTRQVGRVPVTLRGRGRRGRP
PSRTTGARDIAGLPVMEDLSTTASPEEKFTRSVRLPDGGEKSGTSGFCALRRSDSPEIPF
QAVTVPSDCADSSTGSSFVGLRVVAKWSSNGYFYSGMITQDVGAGKYKLRFDDGYECDVL
GKDILLCDPIPLETEVTALSEDEYFSAGVVKGHRKESGELYYCIEKEGQRKWYKRMAVIL
SQEQGNKLREQFGLGPYEPVTPVTKAADISLDNLVEGKRKRRSNLGSPSTSSSSTTPTRK
GQEGPRVPPVSLSGKRKLIASEDERSPAKRGRKSAMIKAGPVRTGEFVSTCEGVDAADPP
VLDSDHGPLPHNKTLFLGYAFLLTMATPSDKLVNHQKLSDGPTGSSEEEEDFLEMTPYDK
HYIAQQLRAGAGYILEDFNETQCNAAYQCLLIADQHCRTQKYLLCLARGIPCVSHIWVHD
SCHANQLQNYRNYLLPAGYSLQEQKLLEWHPRENPFHNLKVLLVSDQQENFLDLWSEILM
TGGAASVKQHYSHAHNKDIALGVYDVVVTDFSCPAGVLKCAEALRLPVVSQEWVIQSLIA
GERVGYKQHPKYKHDYVPQ
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggaagtgcggctgggttgggcgacgggcgggcaggcggcctagggccc
ggccgggctccgcagcctgtggcgtcccgcacggagcgcggcgggagcagccagctggac
cctggcttctcgcagcaggacacgcccctcctcatcgtggaggactcgcagccccagggc
gcggaggcggacgcggagcgggcttggctcggcgtgctggcccgccggctgccggcccgg
cggagcccgagccccgtgctggacatcggccgcggtcctgctggcagccgggcgccgcgg
gagcgactcgcaggtaagggcggggcgcggggtgatggtgggtccgcgtaccgcggccgc
gctgacggcgctgtgctggcagagcccatggagagcccggcccgcccgagcgcctctgga
ccgcgggactgcgcagcggaggagtctccagcgcccgaccgggagagcagtgcccttgga
aaggccggggaacgaagtgaaggtgatgttgaggactgtgcttcttcgccgtgtgtagaa
gatacaggcatgtcacagctccagttcggagttctagagctgtcgcagagccaggacttg
gagagtgacttagtgcccagtgagggagatgctaggcatcagctccactctggacccact
gtcctttcttccagacttgtcaagaatgaatctaaatatgaattttgtgcagacaacaca
gaaactgactccattacagaagcacacactgctttggaaacccaagcaaagaagtctgaa
aggtcaaagactgtgtcttgcactttcagaactctgcaggaagcagaagagcataccaga
aaggagacacatgtcagtggtgcttctaaaactgaggaatcccttggttctggtcatgag
gagtcagatatcttgtcaacacaggaagagatgtttcccgagaatcctgcaacagcaact
gcagggagtggctgtccaataaccaggatggaagagggaagttctctggcatgcactcct
gcccgcagtctgcaagtcctgcagctctctggacaggcattccttgtacaggagggtgat
tccactgtctcttcaggcctagctattcctcctcctgtttcctttggaccaaatgccctt
gtccccagcagccctactgaacgggggagagcagaagatgaacagatggatatatctatg
cctgcagatggaagagaactgatgcaaaagcggagaggagatatgctggtggagatggcc
tttccttgtgtccctccaagacctcttgttcagccacaggcttcaactccagtgtcccag
agtgccccaaccttctttcctggatctttagctataccatcacaaccagagttctctcat
gatatctttgttccaactcagagtccagagaataggcatgcagaagaaaaaactgctggt
ttaacccctttatgcttaccaggagatctctctggatctacagatgctttgtcaaagatg
tctacaggtgactctgtgtcacagcctcctgattcctgtaaactgatgctttctgcaagt
ggatgtagccagcccacgaatacagacatcagttcaggctctttgaacacgggccaagac
agtgaaaccacacaggtagagagaatttctgaatgcaaggcctcagactcaagacgctgt
tctgtggagaatgataaaataaaactaaaagtgaatgcaggtgatctagcaccctctgaa
aactgtgaaaaagcaaaaaaggaggatgtagagactgcaggaatgcctgtaggacagttt
gttagtgcaggtgttgcaggagatgggccattagcctctgcagttcatcaggagattgag
tgtatttctggaagtcaggctgctgcagatcagtctggtctgcctgagattttttcatat
gctcaagagacttccagacctgaggcagttcctgagactcagtgtgaagaacaagaagaa
aaactgcaaataaaggaagataggtctcttgttaatataacactttctcataagtttatt
cttgaaagggaaggacagtgtcatgaagacacagaagtgaatgattcttgtaaaaatagc
aaaaatgtagcccaggagttagaagaggttggaccagaatgccagggaaaagaagctttg
aaagattgtacttttgatgctggagaggcaaagagcatggataaactgtctactaacatg
gcaaagctcaatgaagttttagctaagccttctgtaggggaggtaccggagcagcgcgat
ttgcttctgaacttaaagagtgatgtccaatcagaagtggcattgtgtgccaaaaaccat
cccgattgttcagaattgggacaggtagtgataagcaatcagccatcacttcaagagaga
gggtttgaaacacatggggttcagcatgagaatccagtactacagaatatggaggatact
gttacaacaaggaatctggagcaagaagagcaaatgcagccacaggagaaggcaacttct
aaatcccccagtccttccagtggaaccccgtttcattttactttgccgaaggagggtgat
gtcattcagtccttaagtagcataacaccacctcttactggccatctcaaaatgggaccc
aggagacacagcacaccaattgtggatgatacttgcccagacagtactatagcaaccagt
gatgttacagcagagggcacaatggggaccaacaatgtcactgtggaaagtgcagtggta
tcagcagatgtatcagaagtgtatgagaaaggagagtctggtgtggttcctgagtcggat
gcaaaactttctctgcgaatgaaccttgttacccctgtgaatgatgggagcgaggagtcc
ttgccgttcagcttggaaaagcctgcaaccagtgacaggaaagatggatcctctgctgct
gctagctcccagaaagcatcatctgtgttcagtcgtgtctgtgaagttcgtcgagaggat
gaggccagaggtcatggtctttccacttctccatttaggggggatcagttaatttttcct
ggcccaaaagaagatgctgaattacataccaatcccagtgattggcagtaccagccgcag
aaggcagacggcagtggtggacagagcctaattcctcagaggatacagcaggactgccat
caacagtcttctgatgcagaggatggagagtctatggagactgatgttgtaagcactcag
gcagaagatggaaaaagaatgcagaaaaaacaaagtaaggctgttcaaattgatcaaagt
caagagaggtgggaaaacatcaagaataaagggatccaaactacagcagactgtcttttt
accccaacaactactgttacaacagcaacacagacatcagaagaaatctgtagacaggtg
gaaacgggaaccagtatgtctgggcaaaaacctgggcaacaagatgtgaacattcaaact
gacgagagtggggaaaagcttgtcaacacctctggagacgacacggactctttgcgcagt
cagggagaggaggaatttaaccttctttacccacccaaaggccgagttcagcgtcgccac
atgcgaactattcgagaggtgcgcactgttgttacgcgtgttataacagatgtttactac
atcaatggtgcagaggtggaacgaaaggtggttgaggaaactgaggagcctgtagtggag
tgccaggaatgtgagaccgacatgtccccctctagaactgcagggggctcgtcgctgacc
tcaggggaccttggtgatgtcagctctttctcgtctaaggcctcgagtctccaccgtaca
tccagtggaggaagcagtggtcactctgccacacacagcagcagcagctcagggcgagga
actggagctgtaaaagggaaagtgtgtgggacagaaaccggagaatttgctttacccatt
ggcagaggcatcttaggaaaattgagccctaggaagggagctggtcagcctgcatcgtca
ctcagagttagtcagacaggagcactgccttgtgaggaagaggaggactgtatgcctggc
actcggcaggttggcagagtacctgtgacacttcgtggacgaggaagaagaggacgccca
ccatctcgaacaacaggagcaagagatatagctggacttccagttatggaggatctctca
actacagcatcacctgaggagaaatttactcgttcagttcgcctgccagatggaggagag
aaatctggcacttctggcttctgtgccttacgtcgtagtgactctccagaaatcccattt
caagcagtgactgttccttcggactgtgcagactcatccactgggagcagctttgtgggc
ctcagggtagtagcaaagtggtcctcaaatgggtacttttattcagggatgattacccaa
gatgttggagcaggaaagtacaagctgcgctttgatgatggatatgagtgtgatgtgcta
ggaaaagatattttgctgtgtgatcctatcccactggagacagaggtgaccgcactctct
gaggatgagtacttcagtgcaggtgtggtgaagggacaccggaaggagtctggagagcta
tactactgcattgaaaaggaaggccagaggaagtggtacaaacgaatggctgttatcctg
tctcaggagcaaggaaataagctgcgggagcagtttgggctaggtccttatgaacctgtc
acccctgtgaccaaagcagctgacatcagtcttgataatctggtggaggggaagaggaag
cgacgtagtaaccttggttctcccagcacttccagcagcagcacaactcccactcgtaaa
gggcaagagggtccacgtgtcccaccagtctcactgtctgggaaaaggaaacttattgct
tctgaagatgaacgatccccagctaaacgtggccgcaagtcagcaatgataaaggctggg
cctgtgagaactggagagttcgtaagcacctgtgaaggtgtagatgctgcagatccccca
gtactggacagtgaccatggacccttgccccacaataagaccctctttttgggctatgcc
tttcttctcaccatggcaacaccaagtgacaaattggtcaatcaccagaagctatcagat
ggtcccactgggagcagtgaggaggaagaagattttttagagatgactccgtatgataaa
cattacatagcacaacagctgcgagcaggagctggctatatcctggaagacttcaatgaa
acccagtgtaatgcggcataccagtgtcttttaattgcggaccagcattgtcgaactcag
aaatacttgctgtgccttgccagagggatcccttgtgtgtctcatatctgggtccatgat
agctgtcatgctaaccagcttcaaaattatcggaattaccttttgccagctggctacagc
ctccaggagcaaaagttgctagaatggcacccacgagaaaacccattccataacctgaag
gttctcctggtgtcagaccagcaagagaacttcctggatttatggtctgaaattctcatg
acagggggagcagcatctgttaaacagcattactcacatgctcacaacaaagatattgct
ttgggtgtttatgatgtggtggtgactgatttttcctgcccagctggtgtcttaaagtgt
gcagaagctttacggctgcctgttgtctcgcaagagtgggtgatccagagtcttattgct
ggggagagagtaggctacaagcagcatccaaaatataaacatgactatgtccctcagtaa
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integrated database retrieval system
