Pyrgilauda ruficollis (rufous-necked snowfinch): 121352455
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Entry
121352455 CDS
T07608
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121352455 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121352455 (XPC)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121352455 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
121352455
NCBI-ProteinID:
XP_041321345
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MGRKRRASTRPAAAKKRRSGGLPKEEEEQQEEEEEEEDDFEDKKPSIKKTSKAPARKKGE
DCDTEVSKSAKTSKPSKREPKSQIKESKKNARNKENCIKEETCSDPLKHPQKEMKIKTES
PVKKEMDEDNTDNDDDDESEDEWEDVEELQEPATDKLEEAAVLPSVGLPSNPVEIEIETP
EQVKKRERREKRKAEFEMYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPDLL
AIGLSIVPTRFTQVPAGQVGLVYLSNLVKWFVGTFTVNDELSTEKGEPLQSTLERRFAIY
AAQDDEELVHIFLIILRALQLLCRLVLSFQPIPLKETRPKGKSSSKRLSHSSTSEAQESS
ATTPKAVAETCPCKKAKQDEKSSESKENNKEPKKPKTAQTKRTHKSKLTEGSQEQKESNN
ETSSAEKDVPVRPKNDRRRRVASKVCYKEESGSDEGSASDFELSEEESDFSDEDFESVPK
RRRSSQASQNSKLTTMKRSKAETSETRQSKNVCEAETKPAKSATPGLHQAQRKRNKIISS
DEDEGHQEMRKAVGTDQWLEVFLEPEDKWVCVDCIHGNVGQPQLCFAHATKPLFYVVGFD
NDGSVRDVTQRYDPVWMTSTRKSRVDPEWWEETLQPYESPHVERNKKEENEFQVKLQDQP
LPTAIGEYKNHPLYALKRHLLKYQAIYPETAAILGYCRGEAVYSRDCIHTLHSRDTWLKQ
ARVVRIGEVPYKMVRGFSNRARKARLAEPANRDLEDLALFGRWQTEEYQPPIAVDGKVPR
NEYGNVYLFLPSMLPVGCVQLKLPNLNRVARKLNIDCAQAITGFDFHGGYSHPVTDGYVV
CEEYKEVLVAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKAEPSA
PETEKGGGFSSDEEGAPSSESTVGNTAMYWPQNRQLEKQEDITTKKSKREKRGEAAQLFP
FEKL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaagcgcagggcatcgacccggcccgcggccgccaaaaagaggcgctccggg
gggctgccaaaggaggaggaggagcagcaggaagaggaagaagaagaagaggatgatttt
gaagataaaaagcccagtataaaaaagacctcaaaagctccagctaggaaaaagggagaa
gattgtgatactgaagtttccaaatcagcaaaaacttccaaaccttcaaaacgagaacca
aaatcacaaataaaagaaagtaaaaagaatgctagaaataaagagaattgtatcaaagag
gaaacgtgcagtgatccactgaagcatcctcagaaggagatgaagataaagacagaatct
cctgttaaaaaagagatggatgaagacaatactgacaatgatgatgatgatgaaagtgaa
gatgaatgggaggatgtggaagaacttcaggaacctgctacagataagttagaagaagct
gctgttcttccatcagtggggctgccaagcaatcctgttgagatagagattgaaacccca
gagcaggtgaagaaaagagagaggagagaaaaaagaaaagctgagtttgagatgtacctt
cggagaatgatgaaacgtttcagcaaggaagttcgtgaggacacacataaggttcatttg
ctgtgtttattagcaaatggtttctacaggaacaggatctgcagccagccagatctcctc
gccatcggtctgtccatcgtccccacacgcttcacccaagtgcctgcaggccaagtgggc
cttgtctacctttccaacctggtgaaatggtttgttggaaccttcactgtcaatgatgag
ctttccactgaaaaaggagagccccttcagtcaacactggagaggaggtttgccatctat
gctgcacaggatgatgaggagctcgttcatatatttttaattattctgcgagcattacag
ctactgtgtcgcctcgtgctgtcttttcagcctattcctctcaaggagacaagaccaaag
ggaaagagctcatccaagaggctgtctcacagcagcacctctgaggcacaggagagttct
gccacgacacccaaagctgtggcagaaacatgtccctgcaaaaaagccaagcaggatgaa
aaatcctcagagagcaaagaaaacaacaaggagccaaagaaacccaaaactgcccagacc
aaaaggacacacaagtcaaagctgactgaaggtagccaggaacagaaggaatcaaataat
gagaccagttcagcagaaaaagatgtgccagtcaggcccaagaacgaccgccggagacga
gtggcctccaaagtctgttacaaggaagagagtggaagtgatgagggcagtgcttcagac
tttgagctttcagaggaggagagtgatttctctgatgaggattttgaaagtgtccctaag
aggcggagaagctcacaggcctcccagaattcaaagctgacaactatgaaaaggtcaaaa
gctgagacttcagaaacaaggcagtcaaaaaatgtgtgtgaagctgagactaagccagca
aaaagtgcaactccaggcttacatcaagcacagaggaagagaaacaaaataatttctagt
gatgaggatgaaggacaccaggagatgaggaaagctgtgggcacagaccagtggctggaa
gttttccttgagcctgaggacaagtgggtttgtgtagactgtattcatggcaatgtgggc
cagccccagctgtgctttgcacatgccacaaagccgcttttctacgttgtgggatttgac
aacgatgggagtgtcagggatgtgacacaaaggtatgatccggtgtggatgacctcaaca
aggaagagccgtgtggaccccgagtggtgggaagagacactgcagccctatgaaagtccc
catgtggagaggaacaagaaggaggaaaatgagtttcaagtgaagcttcaagatcaacct
ctaccaacagcaattggagagtacaaaaaccaccctctctatgcactgaagaggcacctc
ttgaaataccaggccatctatcccgagacagctgctatcttggggtactgcaggggagag
gctgtctactccagagactgcatacacactctgcactccagggacacttggctgaagcaa
gctcgagtggtgaggattggagaagtgccttacaagatggtaagaggattttccaaccgg
gcaaggaaggcgcgcctggcagagccggcaaaccgggacctggaggacctggcactgttt
ggccgctggcagacagaggagtatcagcctcccatagcagtggatggaaaggttcctcgg
aatgagtatggaaatgtgtatctcttcttaccatccatgttacctgtgggctgtgtgcag
ctgaaactgccaaacctgaacagagtggcacggaagttgaacattgactgtgctcaagcc
atcactggatttgattttcacggcggctactcacacccagttactgatgggtatgtagtg
tgtgaggagtataaagaggtccttgttgctgcctgggagaatgaacaagcagaaatagaa
aagaaggagaaggagaagcgtgagaaaagagctctagggaattggaagctgctgacaaaa
ggacttctcatcagagagagactgaagcaacgctactccatcaaggctgagccatcagca
cctgagacagagaaaggagggggattctcttctgatgaagaaggagctccaagctcagag
agcacagtggggaacacagccatgtattggccccagaatcgccagctagagaaacaagaa
gacataacaaccaaaaagagcaagcgagaaaagagaggggaagcagctcagctgttccct
tttgagaaattgtga
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