Pyrgilauda ruficollis (rufous-necked snowfinch): 121352697
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Entry
121352697 CDS
T07608
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04145
Phagosome
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121352697
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121352697
09144 Cellular community - eukaryotes
04510 Focal adhesion
121352697
09142 Cell motility
04820 Cytoskeleton in muscle cells
121352697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121352697
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121352697
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121352697
Membrane trafficking [BR:
pruf04131
]
Endocytosis
Phagocytosis
Opsonins
121352697
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121352697
Exosomal proteins of colorectal cancer cells
121352697
Exosomal proteins of bladder cancer cells
121352697
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121352697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
121352697
NCBI-ProteinID:
XP_041321801
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MVPALLLLLLLACPRSWCQQRRIDPSRPLPSAAARRDPASSRGAGNAAGAGGEVGPEMLQ
EMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVITMTQFNRCVPNPC
FPGVPCTESGGSFRCGPCPAGYSGNGTHCSDINECNANPCFPKVQCINTNPGFRCDPCPP
GFTGQLLEGVGLAFARANKQVCTDINECETGAARNCVPNSICINTRGSYKCGACKPGFVG
DQISGCRSQTATGARRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDI
DGVPDEKQRCSDKKCRKDNCVTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTR
NADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGRGDECDDDMDGDGIKNTMDNCRRVPN
PDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVP
NSSQVDTDGDGLGDECDEDDDDDGIPDFRPPGPDNCRLVPNPGQEDSDGDGVGNLCEDDF
DRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDP
GLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFR
AVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQH
RPQVGYIRARFYEGPEVVADTGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPED
YETFRFQQD
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggttccagccctgctcctgctgctgctcctcgcctgtccccgctcctggtgccagcag
aggaggattgatcccagccggcccctcccaagcgccgccgcccgcagggaccccgcctcc
agccgcggtgccgggaatgccgcgggcgcaggaggagaagtcgggccagaaatgctgcaa
gaaatgagggaaaccaacagggtgctgctggaagttcgggatttgttgaagcagcagatc
aaggagatcacattcctgaagaacacggtcatggaatgtgacgcctgcggcatgcggccg
gaggtgacaggtcctgtcatcaccatgacgcagttcaaccgctgtgtccccaacccctgc
ttcccgggcgtgccgtgcaccgagagcggcggcagcttccgctgcgggccctgccccgcc
ggctactccgggaacggcacccactgcagcgacatcaacgagtgcaatgccaacccctgc
ttcccgaaagtccagtgcattaacaccaaccccggcttccgctgcgacccctgcccgccc
ggcttcaccgggcagctgctggaaggggtgggactggcctttgccagggccaacaaacag
gtgtgcaccgacatcaacgagtgtgagactggagctgccaggaactgtgtcccaaactcc
atctgcatcaacactcggggatcctacaaatgcggggcctgcaagccgggcttcgtgggc
gaccagatcagcggctgcaggagccagacagcgaccggggcacggcgctgccccaacggc
gagatcagcccgtgccacgagaaagccgagtgcatcgtggagagggacggctcgctgtcc
tgccagtgcctcgtgggctgggcagggaacggctacgtgtgcgggaaggacacggacatc
gacggcgtccccgacgagaagcagcgctgctccgacaagaaatgccgcaaggataactgc
gtgaccgtgcccaactccggccaggaggacgcggacagggacggcatcggggacgcctgc
gacgacgacgccgacggggacgggatcccaaacgctgaggacaactgcgtgtacacgagg
aacgcggaccagcgcaacgccgacaaggacaacttcggggacgcgtgtgacaactgccgc
caggtgaagaacaacgaccagagggacatcgacggcgacggcaggggcgacgagtgtgac
gatgacatggatggggacgggatcaaaaacaccatggacaactgcaggagagtgcccaac
cctgaccagagggacggggacggggacggcgtgggggacgcctgtgacagctgccccacc
ctcagcaaccccgaccagaaagacactgaccacgacctggtgggagatgtctgtgacacc
aaccaggacagcgacggggacggccaccaggactcgagggacaactgccccacggtgccc
aacagctcccaggtggacacggacggtgacgggctgggggacgagtgtgacgaggatgat
gatgatgatggcatccccgacttcagaccccccggccccgacaactgcaggctggtcccc
aaccccggccaggaggactcggatggggacggcgtggggaacctgtgtgaggatgacttc
gacagggacatggtgatcgacaggatcgacgtctgccccgagaacgccgaggtgacgctc
accgacttcagggccttccagaccgtggtgctggaccccgagggggacgcccagattgac
cccaactggatcgtcctcaaccagggcatggagattgtccagaccatgaacagcgaccct
ggcctggctgtagggtacacagcctttaacggggtggacttcgagggcaccttccacgtc
aacacggccacggacgacgactacgccgggttcatctttggctaccaggacagctccagc
ttctacgtggtgatgtggaagcagatggagcagacctactggcaggcaaaccccttccgg
gccgtggcagagcctggcatccagctgaaggcagtgaaatccaaaacgggccctggggag
tacctgcggaattccctgtggcacacgggagacaccacggaccaggtgaagctgctctgg
aaggacccccggaattcgggctggaaggacaagacctcctaccgctggttcctgcagcac
cggccccaggtcggctacatcagggctcggttctacgagggccccgaggtcgtggcagac
actggagttgtcctggacaccaccatgagagggggacgcctcggggtcttctgcttctcc
caggagaacatcatctggtccaacctccgctaccgctgcaacgacaccatcccagaggac
tacgagacgttccggttccagcaggactaa
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