Pyrgilauda ruficollis (rufous-necked snowfinch): 121352838
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Entry
121352838 CDS
T07608
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04068
FoxO signaling pathway
pruf04110
Cell cycle
pruf04120
Ubiquitin mediated proteolysis
pruf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121352838 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121352838 (SKP2)
04150 mTOR signaling pathway
121352838 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121352838 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121352838 (SKP2)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121352838 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_4
LRR_6
F-box_5
Motif
Other DBs
NCBI-GeneID:
121352838
NCBI-ProteinID:
XP_041322047
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MLQGSPSCVWCQSGSTLRASGFCCVCRKHLQEIPSSSTNVSTSLEWDPGKTSELLSGMGV
SALKKDKLGNENTPQDLLVSSSCLPPKRQKVKDNEKDFVIVRRPWLLREAESGIYLDALP
DELLLAIFAYLPLKDLLKVSMICKRWHRLSFDESLWQTLDLTGGNLLPGVLGQLLPAGVT
VFRCPRSCIGDPLFKTSNLLKIQHLDLSNCTVSAADLHSILCLCEKLQNLSLEGLVLSDN
IIKSIARNPSLIRLNLCGCSAFSAEALELMLSSCSMLEELNLSWCEFTASHVKAAVNHVT
SKITQLNLSGYRENLQIADVKTLVERCPLLVHLDLSDSMMLKPECFQYFKQLGFLQHLCL
SRCYQISPAALVELGEIRTLKTLQVFGIVTDSSLQLLEEALPDMKINGSHFTSIARPTVG
NKKSHEIWGIKCRLTLRNPSFL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaggatccccatcctgtgtttggtgtcagtctggcagtaccctcagagcctct
gggttttgctgtgtctgcaggaagcacctccaggagatcccatcctctagcactaatgtt
tccaccagcttggaatgggaccccggcaagacctcggagcttctctcgggtatgggagtg
tcagcccttaagaaagacaagctgggcaatgaaaacacaccacaggacctgctggtgtcg
tcgtcctgtcttcctccaaaaaggcagaaggtgaaggacaacgaaaaggactttgttatc
gtgcgccggccatggctgctccgagaggcagagtcaggtatttatttggatgcacttcca
gatgaattgcttctggcaatctttgcctatttgcccctaaaggatttactgaaagtttct
atgatttgcaagagatggcatcgactttcatttgatgaatctctctggcagactcttgat
ttgactggtgggaatctgctgccaggagtgcttggacagttgttgcctgcaggtgttact
gtgttccgctgcccgagatcttgcattggggatccgttgtttaaaacaagcaatcttctt
aaaattcagcacctggatttgtcaaactgcacagtgtctgctgcagatctccacagtatt
ctttgtctgtgtgaaaagctgcaaaacctcagcttggagggtctagtgctttctgacaac
atcatcaagagcattgctagaaatcccagtttgatacgactaaatctctgtgggtgctca
gcgttttccgcagaagccttggagctaatgttgagcagctgttctatgctggaggagctg
aacttgtcctggtgtgaattcacagcctctcacgtcaaagcagcagtcaatcacgttact
tcaaagatcacccagttaaatttaagtggctacagagagaatctacaaatagcagatgtg
aaaacgctggtggagagatgtcctttgcttgtccatttagacctcagtgacagcatgatg
ttaaagcctgagtgcttccagtattttaaacaacttgggttcctacaacacctgtgcctt
agccgatgttaccagatatcacctgctgccttagtagagcttggtgaaattcgaacactg
aagactcttcaggtatttggaatagtgactgatagctccctgcagctccttgaggaagca
ctacccgacatgaagattaatggttcacactttaccagcattgcgaggccaactgttggc
aataaaaagagccatgagatttggggcatcaaatgcagactgacactgagaaatcctagt
ttcttgtga
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