Pyrgilauda ruficollis (rufous-necked snowfinch): 121352927
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Entry
121352927 CDS
T07608
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121352927 (HDAC9)
Enzymes [BR:
pruf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121352927 (HDAC9)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121352927 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
121352927
NCBI-ProteinID:
XP_041322274
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MLQTIYESESCFSSDGVSGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MVPMVDPIMREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLA
IKQQQELLEKEQKLEQQRQEQELERHRREQQLPPLRGKERGRERAVASTEVKQKLQEFLL
SKSATKDSPANGKNHSMSRHPKLWYTAAHHTSLDQSSPPLSGASPPYKYTLPGAQDAKDD
FPLRKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGNVSSFKKRLFEVTESSVSSSSPGS
GPSSPSNGPTSSTTENDTSVLSSNIQAERLVSQQRLLIQDESVNLLSLYTSPSLPNITLG
LPAIQPQISASTSFKEKQKGETPPLRQGVALAGQYGGNIAPSSTHPHIALEGKPNSSHQA
LLQHLLLKEQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRAAHKLPRHRPLNRTQSAPL
PQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPGSHLEEAEEELHGDHS
MQEERAPASSASIRAESSSAGVDERIGQQVGAVKVKEEPLDSDEDVQTQQMESGEQAAFM
QQEFLAHRHVHQLQIYQAQMATVGMAGSDKHRPLSRTPSSPTDSTLPHPDMDQPSQHVYT
TGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQL
VHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAGAAR
MAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIG
KILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGYNINI
AWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKC
FGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIPNMN
AIASLKKTTEIQSKYWKSVEPYSVPVDCALAESQKQEREETETVSAMASLSVDVEQCIPQ
EGSRAAGEPMEEEPAL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacaatttacgagagtgaatcgtgtttttcctcagatggggtttctggacgt
gaacagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtgaagtcg
gaggttcccgtgggcctggagccgatctcaccgttagacttgcgaacggatctcaggatg
atggttcccatggtggacccgattatgcgcgaaaagcagctacagcaggagctgctcctg
atccagcagcagcagcagattcagaaacaactgctcattgcagagttccagaagcagcat
gaaaacctgacccgccagcatcaggcccagctccaggagcacattaaggaactactagcc
attaaacaacagcaagaactccttgaaaaagagcagaaactggagcagcaaagacaagag
caggaactggagaggcatcgcagggagcagcagcttcctcccctccgaggcaaagaaaga
ggacgagaaagggcagtggccagtacggaagtgaagcagaaacttcaagagttcctgtta
agtaaatcagctacaaaagactctccagcaaatgggaagaatcattccatgagccgtcac
cccaagctctggtacacggctgcccaccatacctcactggatcaaagctctccacccctg
agtggggcctcgccaccatacaaatatactttaccaggagcacaggatgctaaggatgat
tttccacttcgtaaaacggcttcagagcccaacttgaaggtacgttcaagattaaaacaa
aaggtgacagaaaggagaagcagtcctttactcaggaggaaggatggaaacgtcagttca
ttcaagaagcgtcttttcgaggtgacagaatcctccgtcagtagcagctcccctggatca
ggtcccagttccccaagcaatggccctaccagcagtacaacagaaaatgacacctcagtt
ttgtcatctaacattcaagctgagcgcctggtttcccagcaacgccttttgatacaggat
gaatcagtgaacttgttgagtctgtacacatccccttctctgcccaacattaccttggga
cttccagcaatacaacctcaaatcagtgcttcaacgtcattcaaagaaaagcagaagggg
gagaccccaccacttagacaaggtgtggccttggctggacagtatggaggaaacatcgct
ccatcatcaactcatcctcacattgctttggagggaaagccaaacagcagccaccaagct
ctcttgcagcatctgttactgaaagagcaaatgagacagcaaaaacttcttgtgactgga
gcggttcctcttcatccacagtctcctttagcagcaaaggagagagtctcaccgggcata
agagctgcccacaaactgcctcgtcacaggcctctgaacagaacccagtctgctcctctt
cctcagagtactttggcccagttggtcatccagcagcaacatcagcaatttttggagaag
cagaaacagtaccagcagcagatccacatgaataagatgctctctaagtccattgagcag
ctcaagcagcctggcagtcacctggaggaagctgaagaagagcttcatggagatcactcg
atgcaggaagagcgagctcccgccagcagtgccagcattagggctgagagcagcagtgct
ggtgtggatgaaagaataggacagcaggtgggggctgtgaaagtcaaagaggagccactg
gacagtgatgaggatgttcaaacccagcaaatggaatctggggagcaagctgcttttatg
caacaggagttcctggcacatcggcatgtccaccagttgcaaatctaccaggctcagatg
gctacagttggcatggcaggatcagataaacatcgaccactttccaggaccccatcttcc
cccactgactccacattacctcacccagacatggaccagcccagccagcatgtctacaca
actggtgttgtgtatgacagtctgatgctgaagcaccagtgcatgtgtgggaactatgcc
aatcaccctgaacacgctggaagaatccaaagcatctggtcaaggctgcaagaaactggg
ttgctaaacaaatgtgagcgaattcgaggtcgaaaagccagtctggaggaaatacagctg
gttcactctgaacatcattcactgctgtatggcaccagcccactgaacagacagaagctg
gaccccaggaaactcctaggaaacgtgtctcaaaaactcttttccttgttgccgtgtggg
ggacttggggtggacagtgacaccgtttggaacgagctgcactcggccggggcggcacgc
atggcggtgggctgtgtcatcgagctggcggcccgcgtggcctcccgggagctgaagaat
ggctttgctgttgtaaggcccccaggccatcatgctgaagaatcaacagccatggggttc
tgcttttttaattcgattgcaattactgccaaatacttgagagacaagctaaatataggc
aagatattgattgtagatctggatgttcaccatggcaacggtacacagcaggctttttat
gctgaccccagcatcctgtatgtttccctccatcgctatgatgaaggcaacttcttcccc
ggcagtggagccccaaatgaggttggaagtggccctggtgaagggtataacataaatatt
gcttggacaggtggcttggatcctcctatgggtgatgttgagtatctcacagcattcagg
actgtgattatgccagctgccaatgagtttgatcctgaaattgtcctggtgtcagccgga
ttcgatgctgtggaaggccacgaccctccgctgggcgggtacaaagtcacagctaaatgt
tttggtcacctaaccaagcaattgctgaagctggcggacggccgtgtggtgctggcactg
gagggaggacatgaccttactgccatctgcgatgcctctgaagcctgtataaatgccctc
ctaggaaatgagctggagcctctcccggaagatattgtgcaccaaatccccaatatgaat
gcaatagcttctttaaaaaagaccactgaaattcaaagcaagtactggaagtcagtggag
ccatactctgtgccagtggattgtgctctggctgagtctcaaaagcaagagagggaggag
acagaaacagtatcagctatggcctctctttcagtggatgttgagcagtgtattcctcag
gaaggcagcagagctgctggtgagcccatggaagaagagccagccttgtga
DBGET
integrated database retrieval system
