Pyrgilauda ruficollis (rufous-necked snowfinch): 121352935
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Entry
121352935 CDS
T07608
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03250
Viral life cycle - HIV-1
pruf03272
Virion - Hepatitis viruses
pruf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121352935
03272 Virion - Hepatitis viruses
121352935
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121352935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121352935
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121352935
Membrane trafficking [BR:
pruf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
121352935
Exosome [BR:
pruf04147
]
Exosomal proteins
Proteins found in most exosomes
121352935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
T2SSM
Motif
Other DBs
NCBI-GeneID:
121352935
NCBI-ProteinID:
XP_041322296
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPGAEAQAEHCRAAEELSRLRKSALGRPLDKH
ESALETLLRYYDQLCSIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALAAAKKDNDFIYHDRVPDLKDLEPIGKASLVKSTPVVVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQS
ILNKSKSVIEQGGIQTVDQLIKDLPELLQRNKEILDESLRLLDEEEATDNDLRTKFKERW
QRTPSNELYKPLRAEGANYHNILNKAMQADGQVKERYQTHRDTIALLCKPEAELNAAIPS
ANPAKTLQGNEVVNVLRTLLASLDEVKKDREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSYTQKVQESLKKQEELLKNIQNAHQDFSKMKQSNNESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIIFARKTERDELLKDLQQSIARE
PSAPSIPLPTYQTTPAAGSKPAASPAPTPAPRTMVGTKPQPPARPPPPVISAASSSSSAL
APSGAAAAPAAVPAPTPGASAPAASTAPSQAQGPPYPTYPGYPGYCQMPMPMGYNPYMYG
QYNLPYAPSPVYQTPGQPPYPPPQQPGYPFPQQPYYQQ
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctcggtgcagctgaagaaggcctcggaggtggacctggccaagccg
ctgtgcaagttcattcagcagagctacccgggcgccgaggcgcaggccgagcactgccgc
gccgccgaggagctcagcaggctccgcaagagcgcgctcggccgcccgctcgacaagcac
gagagtgcgctggagaccctcctcagatactatgatcagctgtgttcaattgaaccaaag
tttccattctctgaaaatcaggtctgtgtaacatttacgtggaaagatgcttttgataaa
ggatcactttttggaggatctgccaaattggctctggcgagtttgggatatgagaagacc
tgtgttttgttcaactgtggagcgttggcaagccagattgcagcagaacagaatctggat
aacgatgaaggactaaaagctgcagctaagcactatcagtttgctagtggtgcttttcaa
cacattaaagacacagttttgtcagccttgaatcgagaacctacagtggacatctctcca
gacacagttgggactctcagtcttattatgctggctcaagcccaagaagtcttttttttg
aaagcgacaagagataaaatgaaagatgctatcatagctaaactagcaaatcaagctgca
gattactatggtgatgcttacaaacagtgtcaatataaagatactttgcccaagtatttt
tatttccaggaggtgtttcctgttctggctgcaaagcactgcattatgcaggccaatgca
gaatatcatcaatctatcctggcaaaacaacagaagaaatttggtgaagaaattgggagg
ttacagcatgcagcagatttggtgaaaacagtggcatctcgctatgatgaatatataaac
gttaaagatctggttgacaaaatcaaccgtgcacttgcagctgctaaaaaagacaatgac
ttcatttaccatgaccgggttcctgacctgaaagatttggagcccattggaaaagccagt
cttgtgaagtctacgccggttgttgttccgctcagtcagaaattcactgacctgtttgag
aagatggttccattgcaagtgcaacagtctgtgagtgtttataaccagaggaaggcagat
ctggtgaacagatcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttg
gcttccctcaatcttcctgctgctattgaagatgtgtctggtgatactgttcctcagtct
attttgaacaagtctaagtctgtgattgagcaggggggaattcagactgttgatcagctg
atcaaagatctgcccgaactgctacaaaggaacaaagaaattctagacgaatccctgaga
ttgttagatgaagaagaagctacagacaatgacctgcgaacaaaattcaaagaacgctgg
cagagaacaccgtccaatgaactctataagcctctgagggcagagggagccaattaccat
aatattttgaataaagctatgcaagcagatgggcaggtgaaggagcgctatcagactcac
cgggatacgattgcacttctgtgtaagccagaggcagaactcaacgcagccataccttct
gccaacccagcaaaaacgctacagggaaatgaggttgttaatgtcttaagaactttgctg
gccagtctggatgaagttaagaaggatagagaacaactggaaaatgacctgaaatctgta
aattttgatatgacaagcaaattcctgactgcacttgcgcaggatggtgctataaatgag
gaggctatctctgtgactgagttggacagaatttatggaagttacacgcagaaagtgcag
gagtccctaaaaaagcaggaagaacttctcaaaaacattcagaatgcacatcaggatttt
tcaaagatgaaacaatcaaacaatgaatctaatttaagagaagaagtcttgaagaactta
gctgtagcaaatgacaactttgtggagcttgtagccaatttaaaagaaggcacaaagttt
tacaatgagctgacagaaatcctgctgaaattccagaacaagtgcagtgacattatcttt
gctcgcaagactgaaagagatgaactgctcaaagatttgcagcaaagcattgctagggag
cccagcgctccctccattccactgcctacgtatcagaccacgccagcagcaggaagtaag
ccagcagcatcgcctgctcccactccagccccaagaaccatggtggggactaaaccacag
ccaccagcacggccaccaccaccagtgatttctgcagcaagcagttcctcttctgcatta
gcaccctctggagcagctgcagctcctgctgctgttccagctcctactccaggagccagt
gcacctgcagcaagcactgcaccttcacaggcacagggaccaccttacccaacttatccc
ggttacccagggtattgccagatgccaatgccaatgggctataatccatacatgtatggt
cagtataatctgccatatgcaccctcacctgtgtaccaaactcctggacagccaccatat
ccgccacctcaacaacctggatacccttttcctcaacagccttattatcagcaataa
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