Pyrgilauda ruficollis (rufous-necked snowfinch): 121353093
Help
Entry
121353093 CDS
T07608
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121353093 (VPS50)
Membrane trafficking [BR:
pruf04131
]
Protein recycling
Others
EARP complex
121353093 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
ERF
Motif
Other DBs
NCBI-GeneID:
121353093
NCBI-ProteinID:
XP_041322553
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVNDLSPIENFRIPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSV
SDGNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFLEQSRSPSVSPSKQPASAVASAVTLFEQYCAGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATID
DTDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgcttatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgacctcagtcctattgaaaactttcggattcctactaaggaggagctcagagaacta
catgaagaaccaactgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgactcctttgatattgtgaagtatgaattagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagataaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattgcagactggccttcagctagcagcagttatttgcacaaatggaaga
agacacctgaatatagcaaaggaagggttcacacaaactagtttggggctccttgcaaat
cagaggaaacgacaattgcttattggactgctgaaatctctgagaacaattaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggattatccaggagctatt
caactctgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactacaagacaccttggaacaaatagaggaacaactggacgtagcg
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacacatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgctggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacacattacatcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccacgaccaagatgaggcagcagttgtgtcttctgtt
tcagatggcaacaatgtgattggaactgaagagaacagttttgaccgcaactatgtaaaa
aagaagttggagcatgggctttcacgaatatggcaggatgttcaattgaaagtgaaaaca
tatcttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagagctaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgaatttaagttcctggagcagtcgcgttccccatccgtg
tcaccgagtaagcagcctgcctctgcagttgcatcggcggtgacgctgtttgagcagtac
tgcgccggaggaaaccccttcgaaatccaggccgacagcaaagatgatgagacagaagac
gtgttagcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagagtat
gatagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacagga
gatgccccaataaaaagtgtttctcgagaaactctgaggagcagaaagagatcggattat
aacctcaataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggcta
gttgggaaatacatgcagatgatgaatattctgaaacctattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacatgtttgaatcaacaggactgggcctcagtagcagcagattacgcaccacgctgaac
agaatccaggagagtctgattgatctggaggtgtctgctgatccttcaggaactctcaca
gctgctgaagagagaaaagagaaggttccaagtccacatctcagtcatctcgtagttttg
acatctggcaattcgctgtatggcttggcggagagagtggtggccacagaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatcttgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgattatgaacaaatgcttcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcgcagcacaacgtatatgtagat
gctcttttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtc
cgtattccattgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttaatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatcctggataaaagaacatagggaatattccactaagcagctgaccaatctggtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgat
gacacagacaggcctaagagataa
DBGET
integrated database retrieval system
