Pyrgilauda ruficollis (rufous-necked snowfinch): 121353111
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Entry
121353111 CDS
T07608
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04621
NOD-like receptor signaling pathway
pruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121353111 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121353111 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pruf04054
]
121353111 (NOD1)
Pattern recognition receptors [BR:
pruf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121353111 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
AAA_16
FumaraseC_C
AAA_22
NPHP3_N
PIF1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
121353111
NCBI-ProteinID:
XP_041322594
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MEGQLCANVDISVSKPPGASPQSFIALLKVHRELLVGRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFVYVLQKVTDAYYELQPWLDEIGYKPSENI
CSKPVVNTDPVSRYCQKLRHDLGRDSKFFMLYAQKEEVLLEEIYSNSIMELVSFTNESLG
QVGQLEALFDDAVGLINEDGETIYVYGDAGIGKSILLQKIQSLWARKELDIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPAEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEVCSPNEPIHPLALLVSLLRGKLLKGSKKILTARTGTEIQKNIIRKKVLLRGFSRN
NLKEYTAMFFKDEQQRALVSNQLEANPNLCSLCSVPLFCWIIFKCFEHFHSMFDSHELPD
SSVTLTDVFLLMIEVHLNRSVKTSLLKSNIRSQAEMFKSRKESLLALGKMAYKGMENSSF
IFEQEEVSSANISEEDLQLGFLRTVKGYSGCDSQATYEFLHLTLQSFFTALFLVMEEKVG
TKELLEFFNECSSMETAQTTCLHIPWLKKQLAGEDPFQNKEHFNFTNMFLCGLLSGSRQK
LFRHLVSPAVIKRKRKTLITYLGENMKSRLKGYTRSRLKSYNQVQVQPNFVWMLRCLYET
QSEKVGRMAARRMHANYIKLAYCNACSADCSAISFVLHHFQKHLALDLDNNNINDYGIKQ
LQPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVSFLGLYSNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKSQTMFEIGMWGNQVGDEGAKAFAEALRNHPTL
TNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLW
LIQNQITAKGVKCLSEALKENTTIQEICLNGNLISQEEAKAFENERRIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgtgctaatgtggacatttctgtaagcaaacctccaggagcaagc
cctcagtccttcattgctttgctgaaggttcaccgagagcttctggtcggtaggatccga
aacacgcagtgcttgattgataacttgattaagaacgactacttctccactgaggatgca
gagattgttgtccagtttcctactcaagcagataaggttcgcaaaattctagacttggtt
caaagcaagggagaagaagtttcggaatatttcgtctatgttctgcagaaagtcactgat
gcttactatgagcttcagccttggctggatgaaataggttacaagccttcagagaatatt
tgtagcaaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gacctgggacgggactccaagttttttatgttgtacgctcagaaggaggaggtgctgctt
gaagaaatctactccaacagtattatggagctggtcagttttaccaatgagagtcttggc
caggtgggtcaattagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactatttatgtctacggggatgcaggaattggaaaatccatcttgctgcaaaagata
caaagcctttgggccaggaaggaattggacataggggccaagtttttcttccgttttcgg
tgtaggatgtttagctgcttcaaggaagatgaagccatatgtttgaaagatctgctcttc
aaatataattgctacccagaccaggaccctgcagaagtgttccatcacatcttgcagttc
cctcatacagttcttttcacttttgatggctttgatgagatctattccaactttgatctc
agcagtgtacctgaggtatgctcacccaatgaacccatccaccccctggcactgctcgta
agccttctcagaggaaagcttcttaagggatccaagaaaattcttactgccaggacagga
actgaaatccaaaaaaacatcattaggaagaaagtgttgctccgcggtttctccaggaat
aacctgaaggaatacacagctatgtttttcaaagatgagcagcaacgagcactggtatca
aaccagttggaagctaacccaaatctctgcagtttgtgttcagtgcctttattttgctgg
attatctttaaatgctttgagcacttccattccatgtttgacagccatgagcttccagac
agttctgttacattaacagatgtatttttgctcatgattgaagtccacctgaaccgatct
gtgaaaacaagtttgctgaagagcaatatcaggagccaagcagagatgttcaaatcaaga
aaggaaagtcttctagctttgggtaaaatggcatacaaagggatggagaactcttccttt
atctttgagcaggaggaagtctcatcggcaaacatctctgaagaagatttgcaattgggc
tttctcaggacagttaaaggttacagtggctgtgacagtcaggccacttatgagttcttg
cacttaacccttcagtcttttttcacagctttgtttttggttatggaggagaaggtgggt
accaaggagttacttgagtttttcaatgaatgttcttccatggagactgctcagactact
tgccttcatatcccctggttgaagaaacagctagcaggggaggatcctttccaaaataaa
gagcactttaattttaccaacatgtttctttgtggcctgctttctggatccaggcagaag
ctcttcagacatttagtttcgcctgcggtcattaagaggaagagaaaaacactcatcaca
taccttggggagaacatgaaatcccgcctgaaaggctacactcggtccaggcttaaaagc
tacaatcaggtgcaggtgcagcccaactttgtgtggatgctgaggtgcctgtacgagacg
cagagtgagaaggtggggaggatggcagcccgccgcatgcacgccaactacatcaagctg
gcctactgcaatgcctgctctgccgactgcagcgccatttcctttgttctgcaccacttc
caaaagcacctggctctggatttggacaacaacaacatcaatgactatggaataaagcag
ctgcagccttgtttcagcaagctggcagtgatcaggctcagtgtaaatcaggtcacagat
cacggcgtgaggatcttgtatgaagaactctccaagtaccaaattgtgtcttttttgggc
ttatacagcaaccaaatcactgatgttggagccaaatatgttgcaaaattaattgaagag
tgttcaagcctggaatatgttaaaataggagcaaacaaaataacgagcgaaggagggaag
tgccttgcccaggccatccagaagagccagacaatgtttgaaattgggatgtggggtaat
caagttggagatgaaggagcaaaggcatttgcagaggccctgaggaaccaccccacgtta
acaaacgtgagtctcgcattcaatggcatcacgacagagggaggcaaaagtattgctgaa
gccatgcagcacaacaactccgtgaggatattctggttgactaaaaatgagctggatgat
gaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggtgtgaagtgcctcagcgaagctctcaaggag
aacacaactattcaagaaatctgcttgaatgggaacctgataagccaagaagaggccaaa
gcttttgaaaatgaacggcggatcatttgcttttga
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