Pyrgilauda ruficollis (rufous-necked snowfinch): 121353122
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Entry
121353122 CDS
T07608
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121353122 (TRIM71)
04121 Ubiquitin system [BR:
pruf04121
]
121353122 (TRIM71)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121353122 (TRIM71)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121353122 (TRIM71)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121353122 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
zf-C3HC4
zf-RING_UBOX
DUF4094
Motif
Other DBs
NCBI-GeneID:
121353122
NCBI-ProteinID:
XP_041322611
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGSSCGGPPRRLHVL
PCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVV
VAAAADEQKNGRAAGAGPAAGSGGGGNNRHHGRPXXXXXXXXPRPRPPRRRRRPPPRAAA
AXAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHFIER
FAAGPAAAGPNAPLALSPPYPASPYNILSVFPDRASYCQHHDDEVLHFYCDTCSVPICRE
CTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVV
QSEVKVVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQQ
VLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSS
GAFAPLTKATGEGLKRALQGKLASFTVVGYDHDGEPRLSGGDMISAVVMGPDGNLFGADV
SDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVMVKSGRSYIGIGLPGLSFGSEG
DSDGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVA
CDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTR
NHRVQLFGPDGVFLNKYGFEGVLWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQ
MDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcgtccaactcctccacctcctcgtcctcctcgcagacctccagc
tcctccgggggcggcggcggctcctcctgcgggggcccgccgcggcggctccacgtcctg
ccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccggcgcgggg
gacgcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcg
ggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtcgtcgtc
gtggcggccgccgccgacgagcagaagaacggccgcgccgccggggccggccccgccgcg
ggctcgggcggcggcggcaacaaccggcaccacggccgcccgcnnnnnnnnnnnnnnnnn
nnnnngcctcggccgcgccctcctcgacgtcgtcgtcgtcctcctcctcgggcggcggcg
gctncggcggcgctcctgctgcggcggccgcacagccggcagggcgagccccgctgcagc
tcctgcgacgagggcaacgccgccagctcccgctgcctcgactgccaggagcacctgtgc
gacaactgcgtgcgggcgcaccagcgcgtccgcctcaccaaggaccacttcatcgagcgc
ttcgccgccggccccgccgccgccggccccaacgcgccgctcgccctcagcccgccctac
cccgcctcgccatacaacatcctctctgtcttccccgaccgggccagctactgccagcac
cacgacgacgaggtactgcatttctactgtgatacctgttctgtccccatatgtcgggaa
tgtaccatgggacgacatgtgggtcacagctttatctacctccaagacgcccttcaggac
tccaggactctgaccattcagctcctggcagatgctcagcaaggacgacaggctattcaa
ctgagtattgaacaggcccaggctgtggcagagcaagtcgagatgaaagcgaaggtggta
cagtctgaagtcaaagtcgtgaccaccagacacaagaaggccttggaagagcgcgagtgt
gagctgctctggaaggtggaaaagattcgccaagtcaaggccaagtcactctacttgcaa
gttgaaaagttgcgtcagaacctaaacaagctggataacaccattagtgctgttcagcag
gtcctggaggagggtcgtaccatggatattcttctggctcgggaccgcatgctggctcag
gtgcaggagctgaagaacgtcagaggccttctccagccacaggaagatgacaggatcatg
ttcaccccccctgaccaggcattgtatatggccattaaatccatgggctttgtcagcagc
ggggcttttgctcccttgaccaaagccacgggggaaggtctcaagcgggcgctgcagggc
aagttggcctcgttcaccgtggtcggctacgaccacgacggggagcctcgcctttccggg
ggtgacatgatctctgccgtggtcatgggcccagatggaaacctttttggggcggacgtc
agcgatcagcagaacgggacctacctggtcagctaccgtccccagctggagggagagcac
ctggtgtccgtgatgatgtgcaaccaacacattgagaacagccccttcaaagtgatggtg
aagtccgggcgcagctacatcggcatcgggctgccggggctgtccttcggcagcgaggga
gacagcgacggcaagctctgccgcccctggggggtcagcgtcgacaaagaaggcttcatc
atcgttgccgaccgcagcaacaaccgcatccaggtgttcaagccgtgcgggaccttccat
cacaagtttggcacgctgggctcccggccgggccagttcgatcgccccgccggcgtggcc
tgtgacgtttcgcgtaggatcgtcgtggccgacaaggacaatcatcgcatccagatcttc
acgttcgaggggcagttcattctgaagtttggggagaaaggaacgaagaacgggcagttc
aattacccgtgggatgtggccgtcaacgcagagggcaagatcctggtctctgacacgagg
aaccatcgcgttcagctgttcgggcccgacggcgtgttccttaacaagtacggcttcgaa
ggggtactctggaagcactttgattcccccagaggtgtgacgttcaatcacgagggccac
ttggtagtgacggacttcaataaccatcgcctcttggtcatccatccggactgccagtcg
gcgcgcttcctgggctccgagggcaccggcaacgggcagttcctgcgcccgcagggagtg
gcggtggatcaggaagggcgcatcatcgtggctgactccaggaaccaccgggtgcagata
ttcgagtccaatggtagctttttatgcaagtttggcactcagggaagcggctttggccag
atggaccgtccttcaggtatcgctgtcacccctgatggcatgatcgttgtggtcgacttt
ggaaacaatcgaattctcgtcttctaa
DBGET
integrated database retrieval system
