Pyrgilauda ruficollis (rufous-necked snowfinch): 121353281
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Entry
121353281 CDS
T07608
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pruf04515
]
121353281 (PCDH8)
Cell adhesion molecules [BR:
pruf04515
]
Cadherins
Protocadherins
121353281 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
121353281
NCBI-ProteinID:
XP_041322928
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MSPLRLLAAACLLALSRCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPHAQMALEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPAFAQSSVT
VELPEDAPPGSLLLDLDAADPDEGPNGEVVYAFSSQVPPEARRLFRLDPRSGHLTLEAAV
DYERTRTYELDVRAQDRGASPRAATCTVVVRLTDVNDNAPRISISALRGAASAAGVAYVS
EAAATESFVALVSATDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTVVKVRMVDQNDNPPVIIHPVLTNGTVEIGVSSKTSRDSLVAQIKARDADDG
ANAELTFAFLEESQQDLFTINSGTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQDIAAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNR
RKKGNNIKNKTALKDQIDISHLEKGHQEEGSQRGNMFEVRTFPSKTSFTSPDPSPAAEEV
STTESGSDSTCLYEGQKRLRGQSGEQGFAATPSYNKEPAPPVAIWKGHSFNTISGREAEK
FSGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGR
ANPHPSPYPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTIT
LLSPPRPARLPDLQEIGVPLFPAPSTRYLGPQTETTEKA
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctggccgccgcctgcctgctggccctgtcccgctgcaagacg
gtgaggtatcgcaccgacgaggagggcgcgccgggcacggtgatcggtactctggccgac
gagatgccggtgaaggcgccgggggagatgagctttcgcctgatgcggcagttcagcaac
agttcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaagcagggctg
gaccgggagcggctgtgcggccaagccccccagtgtgtcctggccttcgacgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgtgacatcaatgac
aatgcaccgcgcttcccccatgcccagatggcgctggaggtgtcggagagtgctgcaccc
ggcactcgcctcccgctggaggtggctgtggatgaggacgtgggctccaactccatccag
agcttccaggtctccctcaacagccacttcggtgtggaggcacagacacgggcggatggg
gcacgctgtgccgacctggtgctgctccaggaactggaccgtgagcgccagccctcctac
accctggagctggtggccaaggacggtggcagtccagcacgctcaggcacagccaccgtg
catgtccgcgttctcgacgccaacgacaacagtccagcctttgcccagagctcagtcacg
gtggagttgcctgaggatgcaccgcccggctccctgctgctcgatctggatgctgctgac
cctgatgagggccccaatggtgaggtggtctatgccttcagcagccaggtgccccctgag
gcacggcggctcttccgcctcgacccgcgctcgggccatctcacactggaggctgccgtg
gactacgagcgcacccgcacctacgagctggacgtgcgtgcccaggaccgcggggccagc
ccccgtgctgccacctgcaccgtcgtcgtgcgcctcaccgacgtcaacgacaacgctccg
cgcatcagcatcagtgccctccgtggcgctgccagtgctgctggcgtggcctacgtcagc
gaggcagcagccactgagagcttcgtggccctcgtcagcgccacggaccgcgactctggc
gccaacgggcaggtgcgctgcagcctccgtggtcacgaccacttcgccctgcagcgagcc
tacgaggacagctacatgatcgtcaccacggcggcgctggaccgcgagcgcatccctgag
tacaacctcaccgtggtggctgaggacctgggctcgccgcccttcaagactgtccgccag
tacacagtgcgcgtgagcgatgagaatgacaatgcgccactcttcgccaaacccctctac
gaggtggctgtaccagagaacaaccccccgggtgcctatatcaccactgtggtggctcgt
gaccctgatcttggccacaatggtaaggtcacctaccggctcctggagacgcaggtcatg
ggggcccccatctccacctatgtctcggtggaccccgccactggggccatctatgccctc
aggacattcaactacgagatcctcaagcagctggacctgaggatccaggccactgatggt
ggctccccacagctctccagcagcactgttgtcaaagtgagaatggtggaccagaacgac
aaccctcctgtcatcatccacccagtgctcaccaatgggactgtggaaatcggtgtgtcc
agcaagacctcccgtgactccctggtggcccaaatcaaagctcgagatgcagatgatggg
gccaatgctgagctcacctttgccttcctggaagagtcccagcaagacctcttcaccatc
aactccggtactggggacattgtgctgaggggtgacctctctgaagagctgggacagcta
ttcaaggtcatcctcactgtgacagacaatggcagacctcccctggccacaactgccaca
gtcaacttcctggtgactgccactgctccgtccagtatccaagacatagcagccaagcct
agctcttgggaaggaaaggctttgcagtgggacatccctctgattgtgatcattgtcctg
gcaggcagctgcaccctccttctggtggctataatcaccattgccaccacctgcaacagg
cgcaagaaggggaacaacatcaaaaacaaaactgccttgaaggaccaaatagacatctcc
cacctggagaagggccatcaggaggagggcagccagagggggaacatgtttgaggtacga
acctttcccagcaaaacctctttcaccagccctgacccctctccagcggctgaagaggtc
tccaccactgagagcggcagtgacagcacttgcctctacgagggtcagaagaggctgagg
ggacagagtggggagcagggttttgctgccactccgagctacaataaggagcctgctcct
cccgtggccatttggaagggacactccttcaacaccatctctggccgggaggcagagaag
ttcagtggcaaagacagcgggaaaggcgacagtgattttaatgacagcgactcagatatc
agcggagatgccctgaagaaagatctcatcacacacatgcagaacggtctgtgggcatgc
acagctgaatgcaagatcctggggcactccgaccgctgctggagcccctcctgtggccga
gccaaccctcatccctctccatatccttcagcacccctctccaccttctgcaagagcacg
tccttgcccagggatccccttcgcagggacaacttttatcaagcccagctgcccaaaaca
gtcgggcttcagagcgtctacgagaaggtgctgcacagggactttgaccggacgatcacg
ctcctctccccaccacgccctgcacggcttcctgaccttcaggagatcggggtgcccctg
ttcccagccccctcgactagatacctgggcccccagactgagacgactgagaaggcgtag
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